| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0150 |
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| Symbol | |
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| ID | 4078817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 165208 |
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| End bp | 166107 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005444 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_612145 |
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| Protein GI | 99079991 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.613999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA CTAACTGGAG CGTTCCCATG TTCAAAGGCT CTATGCCAGC CCTCGTCACC
CCGTTTCGCA ATGGTGAGTT GGATCTGGAC ACGCTCAAAC ACTTGGTGGA ATGGCATATT
GCGGAAGGGT CTACCGGTCT GGTGCCGGTT GGAACCACCG GTGAAAGCCC GACCCTGACC
CACGAAGAGC ACGAACTGGT CATCAAAGTG GTGGTCGAAA CCGCCGCAGG CCGCGTGCCC
GTGATTGCGG GCGCCGGGTC CAACAACACA GTCGAGGCGA TTCGCTTTGT GGAGTATGCG
CACCGCGTGG GGGCAGATGC CGCCCTCGTT GTGACGCCTT ATTACAACAA GCCCACGCAG
CGGGGTATGA TCGCCCATTT CAGCGCGCTG CACGACTGCG CCGACATCCC GATCATCATC
TACAACATCC CGCCGCGTTC GGTTGTCGAC ATGTCCCCTG CCACGATGGG TGAGCTGGCC
AAGCTGCCGC GCATCATCGG CGTGAAGGAC GCAACCGGCA AGCTCGAGCG TGTCAGCCAG
CAACGGGCGT CCTGTGGCGC TGACTTCATC CAGCTCTCGG GCGAAGATGC AACCGCGCTT
GGCTTTAACG CGCACGGTGG CGTCGGCTGC ATCTCGGTGA CAGCCAACGT TGCTCCCAAG
CTCTGCGCCG AGTTCCAGGC GGCGACGCTT GCGGGTGACT ACAAAAAGGC TCTGGACTAC
CAGGACCGCC TGATGCCGCT GCATGAGGCG ATCTTTATCG AGCCGGGTCT TGTGGGTGCA
AAATACGGCA TGTCCAAACT GGGTCTCTGC ACCGAAGAGG TGCGCTCTCC GCTCACGGGA
CTCGAAGACA GCACCAAGGC CAAGATCGAC GCAGCCATGG CCCACGCAGG CCTGCTCTGA
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| Protein sequence | MKTTNWSVPM FKGSMPALVT PFRNGELDLD TLKHLVEWHI AEGSTGLVPV GTTGESPTLT
HEEHELVIKV VVETAAGRVP VIAGAGSNNT VEAIRFVEYA HRVGADAALV VTPYYNKPTQ
RGMIAHFSAL HDCADIPIII YNIPPRSVVD MSPATMGELA KLPRIIGVKD ATGKLERVSQ
QRASCGADFI QLSGEDATAL GFNAHGGVGC ISVTANVAPK LCAEFQAATL AGDYKKALDY
QDRLMPLHEA IFIEPGLVGA KYGMSKLGLC TEEVRSPLTG LEDSTKAKID AAMAHAGLL
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