| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0120 |
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| Symbol | |
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| ID | 4078725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 126813 |
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| End bp | 127649 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005407 |
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| Product | ABC transporter related |
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| Protein accession | YP_612115 |
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| Protein GI | 99079961 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGATG CGGCCAACTC CACAGACGTG CAGGCGGAGA CACTGCTTGA GGTCAACAAC
ATCGAGGTGA TCTACAACCA CGTGATCCTC GTGCTGAAAG GCGTGAGCCT GAACGTGCCC
AAGGGCGGCA TCACCGCGCT GCTCGGCGGC AACGGAGCGG GCAAGACCAC GACTCTGAAG
GCGATTTCCA ACCTGCTTCA CTCCGAGCGT GGTGAAGTGA CCAAGGGCTC TGTCCGCTAT
CGTGGCAGAG ACGTTCACGA GCAGGATCCG GCGGAGCTGG TGAAAACCGG CGTTATTCAG
GTGATGGAAG GCCGCCATTG CTTTGAACAC CTGACAGTAG AGGAAAACCT CCTGACGGGC
GCCTACACGC GCGGCGACAG CAACGCCAAG ATCCAAGAGG ATCTGGAACT GGTCTACACT
TATTTCCCGC GCCTCAAGGA ACGGCGCAAA AGCCAGGCGG GCTATACCTC GGGCGGGGAG
CAGCAGATGG TTGCGATGGG CCGCGCCCTC ATGAGCCGTC CCGAGACGAT CCTTCTGGAT
GAGCCGTCCA TGGGGCTAGC ACCGCAGCTC GTAGAGCAGA TCTTTGAGAT CGTGAAGTCG
ATCAACGAGA ACGAAGGCGT GACCTTCCTT CTGGCGGAAC AGAACACCAA TGTGGCGCTG
CGCTATGCCC ACTACGGCTA CATCCTGGAA TCCGGCCGTG TGGTGATGGA TGGCCCCGCT
GCCGAGCTGC GCGAAAACCC GGATGTGAAA GAATTCTATC TCGGCATGTC CGATGAAGGC
CGCAAGAGCT TTCGCGATGT GCGGTCCTAT CGCCGTCGCA AACGGTGGTT GAGCTGA
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| Protein sequence | MLDAANSTDV QAETLLEVNN IEVIYNHVIL VLKGVSLNVP KGGITALLGG NGAGKTTTLK
AISNLLHSER GEVTKGSVRY RGRDVHEQDP AELVKTGVIQ VMEGRHCFEH LTVEENLLTG
AYTRGDSNAK IQEDLELVYT YFPRLKERRK SQAGYTSGGE QQMVAMGRAL MSRPETILLD
EPSMGLAPQL VEQIFEIVKS INENEGVTFL LAEQNTNVAL RYAHYGYILE SGRVVMDGPA
AELRENPDVK EFYLGMSDEG RKSFRDVRSY RRRKRWLS
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