| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0108 |
|---|
| Symbol | |
|---|
| ID | 4078693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | - |
|---|
| Start bp | 114868 |
|---|
| End bp | 115482 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638005395 |
|---|
| Product | glutathione S-transferase-like |
|---|
| Protein accession | YP_612103 |
|---|
| Protein GI | 99079949 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACTCT ATTATGCCCC GAACACCATT TCAGTCGCCG TCGCCATCGC GCTCGAGGAG
GCGGGTCTCG CCTATGAGGC GGTCAAGATC GACTTTGCCG AGAAACAGCA GACCACGCGC
GCCTATCATC AGATCAACCC CAAGGGCCGG GTGCCCGCAC TGGCGGTTGA GGGCGGCATC
CTGACCGAGA CCGGTGCGCT CCTGGAATTT ATCGCGGACC TCGCACCCGA CGCCGATCTG
CGACCGTCGG ATCCGGTCCT TCAGGCGCGC ATGCGCGAGG TGATGTTCTA CCTCGCCTCC
ACCATGCATG TGAACCACGC CCACAAGATG CGGGGCAGCC GCTGGGCCTC CAACCCCGCC
TCCTTCAAGG ACATGGCACG CAAGGTGCCC GAGACCATGG CCGCCTCTTG CGAGTACATC
TGCAACCACG GGCTGCGCGG GCCTTTTGTG CTCGGCGACA CCCCCTGCCT AGCAGATTTC
TACCTCTATG TGGTCTGCAC CTGGCTCGAG GGTGACGGCG TGAAGCTGGC AGGTTTTCCA
AAACTCAGAG CCTTCATCGA GGCGATGGAC GCGCGCGACA GCGTCAAGAC TGTGCGCGCC
AAAGATATGC TTTAA
|
|---|
| Protein sequence | MQLYYAPNTI SVAVAIALEE AGLAYEAVKI DFAEKQQTTR AYHQINPKGR VPALAVEGGI
LTETGALLEF IADLAPDADL RPSDPVLQAR MREVMFYLAS TMHVNHAHKM RGSRWASNPA
SFKDMARKVP ETMAASCEYI CNHGLRGPFV LGDTPCLADF YLYVVCTWLE GDGVKLAGFP
KLRAFIEAMD ARDSVKTVRA KDML
|
|---|
| |