| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0107 |
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| Symbol | |
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| ID | 4078692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 113804 |
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| End bp | 114856 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005394 |
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| Product | saccharopine dehydrogenase (NAD+, L-lysine-forming) |
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| Protein accession | YP_612102 |
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| Protein GI | 99079948 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0686] Alanine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATC TCTGGGTCCG GGCCGAACAG CGCCTGAACG AGGATCGCGT GGGGCTGACG
CCTGCAGGGG CCAAGGCGCT TCTGGAAGCG GGTATTCGCG TTACCGTCGA AGAAAGCAGC
AGCCGCGCCA TCCCGCTTCA GGGCTACATC GATGCAGGCT GCGAAATTGC GCCAGAAAAC
GCCTGGCCCG ATGCGCCGCG TGACGCCATC ATCTTTGGCC TCAAGGAGCT GCCCGACGAC
GGCACCCCAC TGCCCCATCG CCACATCATG TTTGGTCACG CTTTCAAAGG CCAGCACTCC
GGCAAGGAAC TGCTGCGCCG GTTCCGCGAG GGCGGCGGGA CGCTTTATGA TCTGGAGTAT
CTGGTGGATC CGTCCGGCCG CAGGGTCGCC GCCTTTGGCT ATTGGGCCGG GTATGCAGGT
GCTGCTGTCA CGCTCAAGGC CTGGGCCGCA CAGCAGCGCG GCGAAACCTG CGGGCCGGTT
GGGGTCTACA AGAACAAGGA CGCGCTTCTG GCCGATCTCG GCCGCGAGTT GGACGCCACC
GGTGCAGACC GTCCCAAGGC CATTGTCATC GGCGCTCTGG GTCGGGTGGG CACTGGCGCT
GCGGATCTCT GCGAGGCGAT GGGTGTTGCC GTCACCAAAT GGGATATGAA CGAGACCGCG
AGCGGCGGAC CGTTCCCGGA AATCCTCGAC CATGATCTGT TCCTGAACTG CATCTTTGCC
CGCCCCGGTA CGCCCGTTTT TGTGCCCAAA GAGGCGCTCA CGGCCGCGCG CAACCTTACC
GCAATCGGGG ATGTAGCCTG TGATCCGGAC AGCGATTACA ATCCCGTCCC CGTCTATTCC
CGCGCAACCA CATGGGATGC GCCGGTTGTA CGTGTTGCCA ATGATCCAGT CCTGGACGTA
ATGGCGATCG ACAACCTCCC CTCGATGCTT CCTGCCGAAA GCTCCGAGGA TTACGCGGAT
CAGCTTCTGG CAAGCCTTCT GACCCTGTCC GATCTGGATG CGGGCGTCTG GGGCCGGGCC
AAGGCGGTCT TTGACGAACA TGTGGCGGGC TGA
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| Protein sequence | MTHLWVRAEQ RLNEDRVGLT PAGAKALLEA GIRVTVEESS SRAIPLQGYI DAGCEIAPEN
AWPDAPRDAI IFGLKELPDD GTPLPHRHIM FGHAFKGQHS GKELLRRFRE GGGTLYDLEY
LVDPSGRRVA AFGYWAGYAG AAVTLKAWAA QQRGETCGPV GVYKNKDALL ADLGRELDAT
GADRPKAIVI GALGRVGTGA ADLCEAMGVA VTKWDMNETA SGGPFPEILD HDLFLNCIFA
RPGTPVFVPK EALTAARNLT AIGDVACDPD SDYNPVPVYS RATTWDAPVV RVANDPVLDV
MAIDNLPSML PAESSEDYAD QLLASLLTLS DLDAGVWGRA KAVFDEHVAG
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