| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0106 |
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| Symbol | |
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| ID | 4078691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 112632 |
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| End bp | 113774 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005393 |
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| Product | saccharopine dehydrogenase (NADP+, L-glutamate forming) |
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| Protein accession | YP_612101 |
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| Protein GI | 99079947 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTC ACTGGTGCGG CACCGGCCTC TCCGCCATTC CCGGCCTGCG TCGCCTGCTC
GAAGCGGGTC ACGACGTCGC CGTCTGGAAC CGCACACCCG AAAAAGCCGC CGAGGCTGTT
GGGGATCTGA CCACCAACAT CCACAAATTC TCCATTGCAC GCCTCTCGGA GCTTCTGAGC
CCGGCGGACG TCGTGGTCTC CATGCTGCCC GGCGACTGGC ATGTGGAACT CGCCGAGCTC
GCAATTTCCA AGGGGGCGCA TTTTGTGTCC TCCTCCTACA TCTCGCCGGA GATGCGCGCC
CTCGACCAAA AGGCCAAAGA CGCCGGAGTC GCGCTGGTCA ATGAGGTCGG GCTTGATCCG
GGCATCGATC ACCTGATGGC CCATGCCCTC GTGGCTGAAT ACGCGGAATC TCCGGCCTTC
GACGCGGACA ATGAGATCAG CTTTCTGTCC TATTGCGGCG GCATCCCAAA GATCCCGAAC
CCATTTCGCT ACAAGTTCAG CTGGTCGCCC CTCGGCGTGC TGAAGGCCCT GCGCTCGCCC
TCGCGCTCGA TCCGCGATTT TGAGGTTCTG GACGTGGCGC GCCCCTGGGA TGCGATCTCG
AGCTATGACG CGCCGCTTGC GACGCCCGAA ACCTTTGAGG TTTATCCCAA CCGCGACAGT
CTGCCGTTCA TGGAGCAGTA TCACTTCGAC AAGGACTGGA AGGTCAAAAC CTTCGTGCGC
GGCACCCTAC GTCTGAATGG CTGGACCGAG GCCTGGGCGG ATGTCTTCAA AGAAGTCGAA
ACGCTTGAAG GCCCCGAAGG CGATGCTCGC CTCAAGGAAA TGTCCGATCA GTTCTGGGAC
GAAAACGCCT ATGACGAAGG CGAGCCGGAT CGCGTGGTGC TCTGTGTGGA CCTCAAGGCG
GAAAAAGACG GCCAGACCAA GTGGCACAAG ACCTATGTGA TGGACGCATG GGGCGACGAG
CGCGGAAGCG CCATGGCGCG TCTGGTGTCC TATCCGGTGT CCTACGCCAT TGAGGCCGCG
ATGAACGGCA AGATCGCACC CGGCGTCAGC GCCGCGCCCA GCGATCCGGC GCTGGTGGAC
AGCTGGATGG GGCGCATCGG CGCACTGGCG CAGCACCTTC AGGTGGTGTC CCACCGCTCC
TGA
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| Protein sequence | MTIHWCGTGL SAIPGLRRLL EAGHDVAVWN RTPEKAAEAV GDLTTNIHKF SIARLSELLS
PADVVVSMLP GDWHVELAEL AISKGAHFVS SSYISPEMRA LDQKAKDAGV ALVNEVGLDP
GIDHLMAHAL VAEYAESPAF DADNEISFLS YCGGIPKIPN PFRYKFSWSP LGVLKALRSP
SRSIRDFEVL DVARPWDAIS SYDAPLATPE TFEVYPNRDS LPFMEQYHFD KDWKVKTFVR
GTLRLNGWTE AWADVFKEVE TLEGPEGDAR LKEMSDQFWD ENAYDEGEPD RVVLCVDLKA
EKDGQTKWHK TYVMDAWGDE RGSAMARLVS YPVSYAIEAA MNGKIAPGVS AAPSDPALVD
SWMGRIGALA QHLQVVSHRS
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