| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0044 |
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| Symbol | |
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| ID | 4078707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 46543 |
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| End bp | 47076 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005331 |
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| Product | putative lipoprotein |
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| Protein accession | YP_612039 |
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| Protein GI | 99079885 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.288317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTGC CTGATCGACG CAAATTCTTG AAGCTCACGC TGGCGCTGCC TCTTGGCGCC
AGCCTTTCTG CCTGCGGGTT TGAGCCTGTT TATGGCCCGG TTGGGGCTGG CACCGCGCTG
CGTGACCAAA TCGCGTTTCA GTCCCCCGAA ACCATCGGCG CGCCACGCGA CAGTGACGCC
TATTACTTTG TGCGCAGGCT CGAAACTCGG CTTGGGCGCT CTGGCGCCCC TGCGTATCGG
ATGGACCTGA CGCTCGACAC CAAAGAGGTG GGCCAAGCGA TCACTGCAGA AGGCAGTATC
ACCCGCTATT CCCTGACCGG CACCGCTGGT TACAGCCTCG TGCGCCTCTC GGACGGGCAG
ATCGTTGCCA GCGGCGAGGT CGAAAACTTC TCTGGCTATT CGGCGAGCGG CACAACAGTT
CAGACGCAGG CGGGGGAAAC GGATGCGCAT GAGCGACTGA TGGTGATTCT GGCGGATCAG
ATTGTGACCC GCCTCTATGC GGCGCCCGGG TTGGGCCGTC CCGAAGGCTC ATGA
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| Protein sequence | MLLPDRRKFL KLTLALPLGA SLSACGFEPV YGPVGAGTAL RDQIAFQSPE TIGAPRDSDA
YYFVRRLETR LGRSGAPAYR MDLTLDTKEV GQAITAEGSI TRYSLTGTAG YSLVRLSDGQ
IVASGEVENF SGYSASGTTV QTQAGETDAH ERLMVILADQ IVTRLYAAPG LGRPEGS
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