Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3758 |
Symbol | |
ID | 4075465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 814075 |
End bp | 814419 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638005278 |
Product | branched-chain amino acid transport |
Protein accession | YP_611987 |
Protein GI | 99078729 |
COG category | [S] Function unknown |
COG ID | [COG4392] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAA CTGAAATGGC GTTTGATCAC GGTACACTCT GGCTGGTGAT CGCGGGGCTT GCGATTGGCT CTTACGGGCT GCGTTTTGCG TTTATTGGCC TCGTGGGCAA TCGCACGATG CCAGCCTGGC TCATGCGCCA CCTGCGGTAT ACGGCCGTCG CCATTATTCC GGCGCTGGTT GCACCCTTGG TAGTCTGGCC AGCCCCGACG CAGGGCGAGC CAAGCCTCAT TCATTTTGCC GCAGCCGCGC TGACTTTCGT GGTAGCGGTC TTTAGCAAAA ACGTCTTGCT CGCCATGGCG ACCGGTGCAT GCAGCCTGTG GACGCTCATG TATGTATTTG GCTAA
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Protein sequence | MTETEMAFDH GTLWLVIAGL AIGSYGLRFA FIGLVGNRTM PAWLMRHLRY TAVAIIPALV APLVVWPAPT QGEPSLIHFA AAALTFVVAV FSKNVLLAMA TGACSLWTLM YVFG
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