Gene TM1040_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3758 
Symbol 
ID4075465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp814075 
End bp814419 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content58% 
IMG OID638005278 
Productbranched-chain amino acid transport 
Protein accessionYP_611987 
Protein GI99078729 
COG category[S] Function unknown 
COG ID[COG4392] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAA CTGAAATGGC GTTTGATCAC GGTACACTCT GGCTGGTGAT CGCGGGGCTT 
GCGATTGGCT CTTACGGGCT GCGTTTTGCG TTTATTGGCC TCGTGGGCAA TCGCACGATG
CCAGCCTGGC TCATGCGCCA CCTGCGGTAT ACGGCCGTCG CCATTATTCC GGCGCTGGTT
GCACCCTTGG TAGTCTGGCC AGCCCCGACG CAGGGCGAGC CAAGCCTCAT TCATTTTGCC
GCAGCCGCGC TGACTTTCGT GGTAGCGGTC TTTAGCAAAA ACGTCTTGCT CGCCATGGCG
ACCGGTGCAT GCAGCCTGTG GACGCTCATG TATGTATTTG GCTAA
 
Protein sequence
MTETEMAFDH GTLWLVIAGL AIGSYGLRFA FIGLVGNRTM PAWLMRHLRY TAVAIIPALV 
APLVVWPAPT QGEPSLIHFA AAALTFVVAV FSKNVLLAMA TGACSLWTLM YVFG