| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3705 |
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| Symbol | |
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| ID | 4075674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 763884 |
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| End bp | 764498 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005225 |
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| Product | hexapaptide repeat-containing transferase |
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| Protein accession | YP_611934 |
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| Protein GI | 99078676 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
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| TIGRFAM ID | [TIGR03308] phosphonate metabolim protein, transferase hexapeptide repeat family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.308201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCAAAC TCTCAGCCTC AGACCCCTAC GCCCACCCGG GCTGTAGCCT CACCAACAGC
ACCTTTGGGG CTTGGGTCGA AATCGGGGCC AATACCCGTG TCGCCAACAG CGCATTTGGC
GACTACAGCT ATTGCGACCG GATGTGCGAC ATCGCCAACG CACAGATTGG CAAATTTGCA
AATATCGCAA GCTGCGTGCG GATCGGCGCG ACAGATCATC CGATGGAGAA GGCCTCTCTG
CACCATTTCC TCTATCGCTC GGCAAGCTAC TGGGAGGATG CCGAGGATGA CGCGGATTGG
TTTGCTCATC GCAAAAGCCG ACGCGCAGAG ATCGGACACG ACACCTGGAT TGGCCATGGT
GCGTTGATCA AGCCCGAGGT CACAATCGGT CACGGCGCCG TGGTGGCCGC TGGTACAGTG
GTCACAAAGG ACGTGGCCCC CTACACAATC GTCGGCGGCA ACACAGCAAA GCTGATCCGG
CGACGCTACA CAGAACCCGT TGCAGAACGG ATGATCGCGC TGGCGTGGTG GGACTGGGAT
CACGCGACCT TGCGTGCAGC GCTCGCGGAT TTTCGCGCCT TACCCGCTGA GGCATTTCTC
GAAAAATACG AATAA
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| Protein sequence | MPKLSASDPY AHPGCSLTNS TFGAWVEIGA NTRVANSAFG DYSYCDRMCD IANAQIGKFA
NIASCVRIGA TDHPMEKASL HHFLYRSASY WEDAEDDADW FAHRKSRRAE IGHDTWIGHG
ALIKPEVTIG HGAVVAAGTV VTKDVAPYTI VGGNTAKLIR RRYTEPVAER MIALAWWDWD
HATLRAALAD FRALPAEAFL EKYE
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