| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3686 |
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| Symbol | |
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| ID | 4075655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 744740 |
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| End bp | 746095 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638005206 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_611915 |
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| Protein GI | 99078657 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.355974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.187253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGT TTGACGCCCT GCCCCCTCTG GACGCCTATC ACGTCGTAGG CGAGGGTCAG
CGTCCAAGCG TCTATGCGGT CTCGGAGCTT GCCAACGACT GCCTCGGCGC GGTTGGACTG
GAAATGGCAA AGCTGATCGA GGTACTGGGG TTGGCCCCCG GCGCGCCCGA CGTCACGGTG
GACCAGCGCC TTGCCTCGCT CTGGTTTGGC TATTCCTTTC GCCCCGTGGG TTGGGAGATG
CCTTCGCTTT GGGATCCGAT CGCGGGGGAT TATCCCTGCG CAGATGGCTG GATCCGCCTG
CACACCAACC TGCCACATCA CCGCGCGGCG GCCCTGTCGG TGCTCGGCTG TAATGCGGAT
CGCGAAGGCG TCGCCAAGGC GGTGCTGACC TGGCAGGGCG ACGCGCTGGA GGCAGCGGTT
GTGGGCGCAG GTGGTGTCGC GGCCGCGATG CGCAGCCGTG AAGAATGGCT GGCGCATCCA
CAGGGCGCGG CGGTCTGCCA AGAGCCTCTG GTGGATTGGA TCAAGCCGCG CCGCGTGGTG
CTGCGCGCGC GCCCGGAGGC CAGCGCAGCG CGACCTCTGA TGGGGGTGCG GGTGCTCGAT
CTGACGCGCG TGTTGGCCGG ACCGGTCAGC ACCCGCACGC TGGCCGGGTT CGGGGCCGAG
GTGCTGCGGA TCGACCCGCC CGATTGGGAC GAGCCGGGCG TGTTGCAGGA CATCTCGCTG
GGCAAACGCA TGGCAAGGCT CAATCTGCGC ACAGAGGCCG GCCGCGCCCA CCTGCGCGCA
CTTCTGGCCG AGGCAGATGT GTTGGTGCAT GGCTTCAGAC CAGGCGCGCT CGACAATCTG
GGGCTGGATT TGGCTACACG CGACGCGATT GCGCCCAACC GGATCGAGGT CACACTCAAC
GCCTATGGCT GGACTGGCCC CTGGGCAAAT CGGCGCGGGT TTGACAGCCT TGTTCAGATG
AGCGCCGGGA TCGCTGATGC GGGGCGGGAC TGGGCGGGCG CACAAAAGCC GACCCCCTTG
CCGGTGCAGG CCCTCGATCA CGCAACCGGC TACCTGATGG CCGCGGCGGT TTTGTCTGCG
CTCTCGGCGG CAGCACGGCA AGAGCCGGTC GGGGTTGCAC GCTTGTCGCT TGCCCGCACG
GCAGAAGCGC TGGTCGCGAT CCCGAAACGG CTATCAGGGC CGGAGATTTC AACTGCCGAG
CCCTGCGACT TTGCCACGTG TGAGGAGGCG AGCGGCTGGG GGGCTGGGTT GCGTCTGAGC
CCGGCGGTGA AGATCAACGG CTGCGAGATG GGTTGGGATA TGCCGGCACA GCCAAGCGGC
ACGCATCCTC CGCAATGGAA CGAGCCGCAA ACCTGA
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| Protein sequence | MSMFDALPPL DAYHVVGEGQ RPSVYAVSEL ANDCLGAVGL EMAKLIEVLG LAPGAPDVTV
DQRLASLWFG YSFRPVGWEM PSLWDPIAGD YPCADGWIRL HTNLPHHRAA ALSVLGCNAD
REGVAKAVLT WQGDALEAAV VGAGGVAAAM RSREEWLAHP QGAAVCQEPL VDWIKPRRVV
LRARPEASAA RPLMGVRVLD LTRVLAGPVS TRTLAGFGAE VLRIDPPDWD EPGVLQDISL
GKRMARLNLR TEAGRAHLRA LLAEADVLVH GFRPGALDNL GLDLATRDAI APNRIEVTLN
AYGWTGPWAN RRGFDSLVQM SAGIADAGRD WAGAQKPTPL PVQALDHATG YLMAAAVLSA
LSAAARQEPV GVARLSLART AEALVAIPKR LSGPEISTAE PCDFATCEEA SGWGAGLRLS
PAVKINGCEM GWDMPAQPSG THPPQWNEPQ T
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