| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3678 |
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| Symbol | |
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| ID | 4075647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 732994 |
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| End bp | 733584 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005198 |
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| Product | ThiJ/PfpI |
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| Protein accession | YP_611907 |
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| Protein GI | 99078649 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGAT TAGCGGTGAT TTTGACACAG GGATTTGCGG ATTGGGAATA CGGGGTGCTG
TGCGGGCTGG GCCGGGCCTA TTTTGGCCTT GATGTCCGCT TTGTGACGCC GGTGCCGGGG
GATGTGATCT CCATGGGTGG TCTGGTGGCG CGGGTGTCCG ACGGGTTTGA GCTGCTCGAT
TCTTGGGAGC CCGATGCAGT GGTGGTCATT GGCGGCACTC TTTGGGAGCA CCCAGACGCA
CCGGACCTCT CCGGCCTGCT CGAAGGTGCT CAGGCCCGCG GTGCGGTACT GGCCGGCATA
TGTGGCGGCA CATTGGCGCT GGCGCGGGCC GGGGTACTCA ATACGCTGCG CCATACCTCA
AATGATGCAA GCTTCCTCGG CCTGCATGCG GCGGGCTATG CGGGTGCTGC ACTATATGTG
GATCAGCCCA AAGCGGTGCG TGACGGAAAA GTCGTGACAG CAGCAGGCAC CGCCCCGGTG
AGCTTTGCTG CAGAGATCAT GACAGCGCTT GATGTGCCCC TTGAGACGGT TCAGCAACTG
AAGTCCATGC TGGGCGCTGA ACACATTGGC ACGCAAGCCC GAAGCGTCTG A
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| Protein sequence | MPRLAVILTQ GFADWEYGVL CGLGRAYFGL DVRFVTPVPG DVISMGGLVA RVSDGFELLD
SWEPDAVVVI GGTLWEHPDA PDLSGLLEGA QARGAVLAGI CGGTLALARA GVLNTLRHTS
NDASFLGLHA AGYAGAALYV DQPKAVRDGK VVTAAGTAPV SFAAEIMTAL DVPLETVQQL
KSMLGAEHIG TQARSV
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