| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3673 |
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| Symbol | |
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| ID | 4075642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 726497 |
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| End bp | 727729 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005193 |
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| Product | mandelate racemase/muconate lactonizing-like protein |
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| Protein accession | YP_611902 |
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| Protein GI | 99078644 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.232525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACTTC AGGACCTCGA CATCATCATC ACTGCGCCCC CTGCCCCGGG TTGGGGTGGG
CGCTACTGGA CTCTCGTGAA GCTCACAACC GATACAGGAG TTGTCGGCTG GGGAGAGTGC
TATGCCTCGA CCGTGGGGCC GACTGCGATG CGCGCCGTTA TCGAAGACGT GTTCGCCCGC
CACATGCAGG GTGAAAACCC CGAAAATATT GAACTCATGT TCCGGCGCGC CTATTCCTCG
GGCTTTACGC AACGCCCAGA TCCGACGGTG ATTGGTGCTT TTTCAGGGCT TGAAATCGCG
TGCTGGGACA TTCTCGGCAA GGATCGGAAC CGTCCTGTCC ACGCCCTTCT TGGCGGGCGC
ATGAATGATC GCATTCGCGC CTACACCTAT CTCTATCCGT TACCGGATCA CGACATCAGC
GCGTTCTGGA ACTCTCCGGA AATGGCAGCC GAGTCCGCCG AAGACGCCGT GAACCGGGGC
TATACCGCAG TCAAATTCGA CCCGGCAGGC CCCTACACCA TGCGCGGCGG CCATATGCCG
GCAATGTCCG ACGTCAGCCG GTCCGTCGCC TTCTGCAAGG CCATCCGGGA GGCGGTTGGC
GACAAGGCGG ATCTTCTCTT TGGCACACAT GGCCAGTTCA CACCTGCAGG CGCGATCCGT
CTGGGGCAAG CGCTCGAACC CTATAGCCCG CTCTGGTACG AAGAGCCGAC CCCCCCGGAT
TCCGTGGGCG ACATGGCGCG CGTGGCGAAA AATGTCCGCA TTCCCGTGGC GACCGGAGAG
CGGCTCTGCA CGAAGGCCGA ATTCGCTGCC GTCCTCCAGG CCGGAGCCGC CGAGATCCTG
CAGCCTGCAT TGGGGCGTGC AGGCGGTATC TGGGAGATGA AGAAAACCGC CGCCATCGCC
GAAGTGTTTG GCGCACAGGT TGCCCCACAC CTCTATGCGG GTCCGGTGGA ATGGGCGGCC
AATATTCATC TTGCGGCCTC CCTGCCAAAC ATCCTGATGG CAGAGACCAT CGAGACAGCG
TTTCATGACC GCCTGATCAA GGGATCGATC CGCGTTGAGG AGGGCTTTGT GACGCCACCG
CAAAGCCCTG GCCTAGGCAT TGAGGTGGAT GAAGAGCTTG CGCGCCAGCA TCCGTTTAAG
GGCGACGATC TGCATCTCAA CATGCAGGAA ACGCCCTGTG ATTATGCCAA TGGCAATGCG
TTTGAGGGCG GCGCGCCACC TATCGAGGGT TGA
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| Protein sequence | MKLQDLDIII TAPPAPGWGG RYWTLVKLTT DTGVVGWGEC YASTVGPTAM RAVIEDVFAR
HMQGENPENI ELMFRRAYSS GFTQRPDPTV IGAFSGLEIA CWDILGKDRN RPVHALLGGR
MNDRIRAYTY LYPLPDHDIS AFWNSPEMAA ESAEDAVNRG YTAVKFDPAG PYTMRGGHMP
AMSDVSRSVA FCKAIREAVG DKADLLFGTH GQFTPAGAIR LGQALEPYSP LWYEEPTPPD
SVGDMARVAK NVRIPVATGE RLCTKAEFAA VLQAGAAEIL QPALGRAGGI WEMKKTAAIA
EVFGAQVAPH LYAGPVEWAA NIHLAASLPN ILMAETIETA FHDRLIKGSI RVEEGFVTPP
QSPGLGIEVD EELARQHPFK GDDLHLNMQE TPCDYANGNA FEGGAPPIEG
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