| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3647 |
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| Symbol | |
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| ID | 4075075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 701992 |
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| End bp | 702876 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005167 |
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| Product | beta-lactamase-like |
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| Protein accession | YP_611876 |
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| Protein GI | 99078618 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.554784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCATT ACCCTGTGAA TATGGACGTC AAACCCGAGG TTCAGGCTTT CTTTGACGAG
GCCACAAACA CGATCAGCTA TATCGTAAAG GATCCCGCGT CGTCCGCCTG CGCCATCATC
GACAGCGTGA TGGACATCGA CTATGCGGCG GGGCGGATCA CCTATGAGCA TGCCGATGCA
TTGATCGATC ACATCACGTC GCAGGGGCTA CAGCTGGAGT GGATCATCGA GACCCATGTT
CATGCGGATC ACCTCTCGGC CGCGCCCTAC ATCCAAGAGA AGCTGGGCGG TAAGATCGCA
ATCGGTGCCA AGATCATGGT GGTGCAGGAC ACTTTCGGCA AGATCTTCAA TGAAGGCACG
GAGTTTCAGC GCGATGGCTC CCAGTTCGAC CGACTGCTGG AGGACGGCGA CACCTATATG
ATCGGCTCGA TGCAGGCTTT TGCGATGTAT ACGCCCGGTC ACACGCCCGC CTGTATGGTA
CATGTGATGG GAAATGCAGC CTTTGTCGGC GATACGTTGT TTATGCCCGA TGGCGGCTCT
GCCCGCGCGG ATTTCCCCGG CGGTGACGCT GGAACCCTGT ATGACAGCAT CCAAAAGGTG
CTGGCGCTGC CGGACGAGAT GCGGCTGTTC ATGTGCCACG ACTATGGCCC GAACGGGCGA
GACATCGCGT GGGAGACTTC GGTGGGCGAC GAAAAGGCCC ATAATATCCA CGTTGGCGGC
GGCATCTCGA AGGAGGAGTT TGTCAAATTC CGCACCCAGC GGGACGCGCA GCTTGATATG
CCGAAGCTCA TCATTCCATC CCTGCAGGTC AACATGCGGG CAGGCGAGGT GCCCACCGAC
AAAGACGGGC ATCCTATGCT CAAGGTGCCT CTGAATGGTC TCTGA
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| Protein sequence | MAHYPVNMDV KPEVQAFFDE ATNTISYIVK DPASSACAII DSVMDIDYAA GRITYEHADA
LIDHITSQGL QLEWIIETHV HADHLSAAPY IQEKLGGKIA IGAKIMVVQD TFGKIFNEGT
EFQRDGSQFD RLLEDGDTYM IGSMQAFAMY TPGHTPACMV HVMGNAAFVG DTLFMPDGGS
ARADFPGGDA GTLYDSIQKV LALPDEMRLF MCHDYGPNGR DIAWETSVGD EKAHNIHVGG
GISKEEFVKF RTQRDAQLDM PKLIIPSLQV NMRAGEVPTD KDGHPMLKVP LNGL
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