| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3642 |
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| Symbol | |
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| ID | 4075070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 699414 |
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| End bp | 700115 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005162 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_611871 |
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| Protein GI | 99078613 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.536333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGAGA AGCGACGACA TTCCTGGATG GAGATCCGGG ACAGTATTCG CAGCATGATC
TTGAACTCGA CCTATGGGCC GGGAGACAAG CTGCCGCGCG ACGAGGAATT CGCCCTGCAA
TTTGGCTGCG CGCGCTCAAC GGTTCATCGG GCAATGCGCG ATCTGGCGCA GAGCGGGGTG
GTCGAGCGCA AGCGCCGCGG TGGCACCACC GTCCGGCGGG ATCCGGTCAC GCGGGCGACC
TTGGACATTC CGATCACCCG GCTCGAAGTG GAGCGACGGG GGAGCCAGTA TCGGCACCGT
TTGCTACGCA AGTCGGTCCA GCCAACCCCG CCTGCGATCA TGGCAAACTT TGATCTCTCT
GAACCCCGCA ACATGTTGCG GGTCGAGGCG CTGCATCTGG CGGACAATCG TCCCTATATC
TTTGAAGATC GCTGGATCTG CCTAGAGACA GTTCCCGAAA TCGCCGACGT GGACCTGACA
CGGGAGAACG CCAATGAATG GCTGGTGCGC AATCGTCCCT ACAGCCGCTG CGATCTGCGT
CTCTATGCCC GCAAAGCCAC CCCGAGCGAT CAGGACGTCC TGCAAAGCCA TGACGGCGAC
GCGTTGTTTG TGATGGAGCG CACAACCTGG ATCGGTGCTG CGCCGATTTC CAGTCTGTGC
GCCGTGGCTC ATCCCGGCTA TCAATTGTTC ACCCAAGGAT AG
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| Protein sequence | MVEKRRHSWM EIRDSIRSMI LNSTYGPGDK LPRDEEFALQ FGCARSTVHR AMRDLAQSGV
VERKRRGGTT VRRDPVTRAT LDIPITRLEV ERRGSQYRHR LLRKSVQPTP PAIMANFDLS
EPRNMLRVEA LHLADNRPYI FEDRWICLET VPEIADVDLT RENANEWLVR NRPYSRCDLR
LYARKATPSD QDVLQSHDGD ALFVMERTTW IGAAPISSLC AVAHPGYQLF TQG
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