| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3641 |
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| Symbol | |
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| ID | 4075069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 698127 |
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| End bp | 699212 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005161 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_611870 |
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| Protein GI | 99078612 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.312252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.742718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAC GCGCGTTTCT CAAGACTGGT GCCATGGGCG CAGCCGCCAC AGCCTTGGCG
AGCCCAGCGA TTGCCCAAGG AAAGATGCAA TGGAAGCTGG TCACAGCCTG GCCCAAGAAC
CTGCCGGGGC CGGGTGTCGC CGCACAGATG CTCGCAAACC GCATCACAAC GCTGTCGGGT
GGACGTATTG AGGTCAAACT CTTTGCTGCA GGCGAGCTTG TGCCGGGACG CGGCGTCTTT
GATGCGGTCT CCGAAGGCAC GGCAGAGCTC TATCATGCGG TTCCGGCCTA CTGGGGGTCC
AAATCCAAGG GCATTTTGCT TTTTGGCTCG CAGCCCTTTG GCCTGCGCGC AGACGAGCAG
TTTGGCTGGC TCTACCATGG TGGCGGTCAG GCGCTCTATG ACGAGATGTA TGGCCGCTTT
GGCATCAAGC CTTTCCTCTG CGGTAACTCC GGCCCGCAAT GGGGCGGCTG GTTCAAAACC
GAGATCAATT CCGCCGAAGA CCTGAAGGGG TTGAAGTTCC GCACCACGGG CCTTGCATCC
GAAATGGCGT CGAAACTTGG CATGGCAGCC GAAGCCACAA GCGGACCGGC CATGTTCCAA
GGCCTGCAAA CGGGTGCATT GGACGCAGGC GAGTTCATCG GCCCCTGGAC CGACAGCGCG
CTTGGCTATT ACCAGGTCGC CAAGAACTAC TACTGGCCCG GCGTGGGTGA ACCCTCTTCT
GCCGAGGAAT GCGGGGTAAA CGCTGACGTC TTTGCCGAAC TGCCGGATGA TCTCAAACAG
GTTGTCTCGC TGGCCTGCGA AAGCCTCTAC AATCCGGTCT GGACGGAATA CACCACCAAG
CACGCACTGG CGCTGAAGAA AATGGTCGAA GAGGACGGCG TTCAGGTCAA GATGTTCCCG
TCCGACGTGA TCGAGGCCAT GGGCACCGCA GCAGCAGAAG TCATCTCTGA GCTGCGCGAA
GACGAAGACG AACTTGTGCG CCGTATCACC GAGAGCTTTA TCAGCTATCG CGACAGTGTG
GGCGGCTACA TGACCTATGC CGACAACGGC CAGATGAACG CCCGCGCCTC GGTTATGGGC
TACTGA
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| Protein sequence | MQRRAFLKTG AMGAAATALA SPAIAQGKMQ WKLVTAWPKN LPGPGVAAQM LANRITTLSG
GRIEVKLFAA GELVPGRGVF DAVSEGTAEL YHAVPAYWGS KSKGILLFGS QPFGLRADEQ
FGWLYHGGGQ ALYDEMYGRF GIKPFLCGNS GPQWGGWFKT EINSAEDLKG LKFRTTGLAS
EMASKLGMAA EATSGPAMFQ GLQTGALDAG EFIGPWTDSA LGYYQVAKNY YWPGVGEPSS
AEECGVNADV FAELPDDLKQ VVSLACESLY NPVWTEYTTK HALALKKMVE EDGVQVKMFP
SDVIEAMGTA AAEVISELRE DEDELVRRIT ESFISYRDSV GGYMTYADNG QMNARASVMG
Y
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