| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3634 |
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| Symbol | |
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| ID | 4075062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 690768 |
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| End bp | 691682 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638005154 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_611863 |
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| Protein GI | 99078605 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.246418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGGG ACGAACCGAT TCGCATCAGA CAGCTTCAAG CCCTTAATAT TCTTGCTGAA
AGTGGGACGA TGAGCCTGAC CGCAAAGGCG ATGAACATCT CTCAGCCTGC GGTGAGTCGG
CTGCTGTCAG ATCTGTCCAA AGAACTTGGA TACCCGCTTT TTTCTCGCAG CGGACGCCGG
CTCACGCTCA CACGTGAGGC ACAGTACCTC TTGCCAGAGA TTCAGCGGAT CTTTGGGGCC
ATGGGCCAAA TCCGAAACCT GCGCCAGAAC ATTCAGGATG GTACCAGCGG CCATCTGAAG
ATCGCCTGCC TGCCCGGATT CTCCACGAGT CACTTGCCAG GTGTGGTGGC CGATTTCCTG
GCGGCGCGCC CCAAAACCAC CCTTACGATC GAACCGGACC GCCCCGAGCG GATTCTCGAC
TGGGTCATCG GTGAGCAATA TGACTGTGGC ATCACGGATG GATTTCGCTC ACATCACGCG
CTGGACAGCA AGACGATCCC CATTCGATGT GTTTGCATTT TCCCGGAAGG CCACCCTCTC
GAAGCCAAGT CCGTTATCCA CCCCGAGGAC CTGGCAGGAG AGCGCATTGC CCATGATCGC
TTTGGGAGTG AGTTCTACCT GCGCCTGCGC GACATCCTTG ATGCGGAAGG CATTGCGATG
GACAATTTCA TTGAGACCCG GCAGTTCACC TGCGCGTGTG AACTGGTTTC CAAAGGGGTC
TGTGTCTCGG TCGTAAGCGA ACTTGATGCG CAAGAATACA TCGGCAAAGG CGTCAGCTTT
CGCCCCTTCT CTGCTAATAT CACGCACCAG CTTTCTCTGG TCTGGCCCCG CCATACGCCC
ACGTCAATTC TCACCCTTGA GTTCCTCGGG CTCTTTGAAA AAAGCCTTGA GCCTTACGCA
ATGACAGAGA CCTGA
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| Protein sequence | MIGDEPIRIR QLQALNILAE SGTMSLTAKA MNISQPAVSR LLSDLSKELG YPLFSRSGRR
LTLTREAQYL LPEIQRIFGA MGQIRNLRQN IQDGTSGHLK IACLPGFSTS HLPGVVADFL
AARPKTTLTI EPDRPERILD WVIGEQYDCG ITDGFRSHHA LDSKTIPIRC VCIFPEGHPL
EAKSVIHPED LAGERIAHDR FGSEFYLRLR DILDAEGIAM DNFIETRQFT CACELVSKGV
CVSVVSELDA QEYIGKGVSF RPFSANITHQ LSLVWPRHTP TSILTLEFLG LFEKSLEPYA
MTET
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