| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3608 |
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| Symbol | |
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| ID | 4075035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 658318 |
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| End bp | 659745 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005127 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_611837 |
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| Protein GI | 99078579 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.221851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.096261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCGC TTGAACAATT CTTCGGTGTG ATCGGAGACC TGACCTGGGG ATGGTCCCTG
GTCCCGATAC TGGTCATTTT CGGCAGTTTC ATCACCGTCG CCACCGGGTT TGTCCAGATT
GAGTTCTTTG GCCGAATGTT CCGCGTCTTG ACCCGCGGTC GTACCGATAC CGGTCAGATT
TCCGCGCGCG AGGCGCTCTT GGTTTCTGTT GGGGGGCGCG TGGGCGGTGG CAATATCGCA
GGTGTTGCGG TCGCCATTAC ACTGGGTGGC CCTGGGGCAG TGTTCTGGAT GTGGGCGATT
GCGCTGGTCG GGATGGCCAC GAGCCTGGTG GAATGTTCTC TTGCGCAACT CTTCAAGCGC
GCAGACCCCC TCACGGGACA ATATCGCGGC GGGCCTGCGC GAGCCATCCT GCACGGTTTG
GGCGAAAACT ATCGCTGGCT TGCTGTGATC TATGCGATTT GCCTGATTGC GGCCTTCGCG
CTTGGGTTCA ACGCGTTTCA GGGCAACACG GTGGCTGGTG CGGCAGAGGC CTCCCTCGGG
ATCGATCGCC TGTGGACGGG TATTTTCCTG GCAATTGTCA CCGGTTTCAT CGTTTTTGGT
GGTATTCGAC GTATCGCCAA AGCGTCCGAG GTTGTGGTCC CGGTCATGGC GGTTGGGTAT
CTTCTGATGG CGCTGATCGT GATCCTCACC AACATCGGCG AGATCCCTCA GGTTCTACGC
AGCATTCTTG CCAATGCCTT TGGCTTTGAA GAGGCGGTCA GCGGGGGCAT GGGCGCTGCA
CTGGCACAGG GACTGCGCCG CGGGCTCTTT TCAAACGAGG CGGGTCTCGG CTCTGCTCCC
AATGTGGCCG CAACAGCTGA GGTGAACCAC CCGATCAGCC AGGGGATCAC GCAGGCGTTT
TCTGTGTTCA TTGACACGAT CATCATCTGC AGCTGTACCG CTTTTGTCAT CCTGCTGAGC
GATGTTTACG TCCCGGGAGC CACCGATATT GACGGCGTCG CCCTGACCCA GAGCGCAATG
GTGTCGCATC TGGGCGCGTG GTCGCAGTAT TTCATGACCT TTGCGATCCT GCTCTTTGCG
TTCTCCTCGG TGATCTACAA CTACTACCTC GGAGAGAATG CAATCTCCAT CCTCACCAAG
ACCCCTCATG CGATGACGCT GCTGAAGCTG GTGGTCGTGG GGATCGTCTT TCTGGGTGCC
GTGGCTCCAA ACGCAACCTC GGTCTTCTTC TTCTCGGATC CGTTGATGGG TGTGTTGGCG
CTGGTGAACC TCTTGGCTCT GATGATGCTT TTTCCCATTG CGCTGCGGGT TTTGCAGGAC
TTTCGAAAGC AGCTGAAAGC GGGGGTCGAG CGGCCTGTGC TGCGTATGGA AGACTTCCCG
GATCTCGATC TGGATCCAAA CGCCTGGCCC AATCGGGGCC AATCCTGA
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| Protein sequence | MQALEQFFGV IGDLTWGWSL VPILVIFGSF ITVATGFVQI EFFGRMFRVL TRGRTDTGQI
SAREALLVSV GGRVGGGNIA GVAVAITLGG PGAVFWMWAI ALVGMATSLV ECSLAQLFKR
ADPLTGQYRG GPARAILHGL GENYRWLAVI YAICLIAAFA LGFNAFQGNT VAGAAEASLG
IDRLWTGIFL AIVTGFIVFG GIRRIAKASE VVVPVMAVGY LLMALIVILT NIGEIPQVLR
SILANAFGFE EAVSGGMGAA LAQGLRRGLF SNEAGLGSAP NVAATAEVNH PISQGITQAF
SVFIDTIIIC SCTAFVILLS DVYVPGATDI DGVALTQSAM VSHLGAWSQY FMTFAILLFA
FSSVIYNYYL GENAISILTK TPHAMTLLKL VVVGIVFLGA VAPNATSVFF FSDPLMGVLA
LVNLLALMML FPIALRVLQD FRKQLKAGVE RPVLRMEDFP DLDLDPNAWP NRGQS
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