| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3601 |
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| Symbol | |
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| ID | 4075028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 650134 |
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| End bp | 651030 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005120 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_611830 |
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| Protein GI | 99078572 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGACG CAACTGATCC TCTCTATCAA GAAATCCAAG GGCCGACGCC GCGCCAGATG
CTGAAGACGC GCGCGCTTGG TCACAAGGGG CTAATCTTTG GCCTCTGTGT GGTTGGCCTC
TTGGTCGTGA TCGCCCTCCT CGCCCCGGTT CTGGCGCCAC ATAATCCCTA TGAGCAAAGC
CTGATGAACC GCATGGTACC CCCTGTTTTT CTGGGCGGCA CATGGGAGCA TCCCCTCGGC
ACCGACCATC TCGGGCGGGA TTACCTGTCA CGCCTGATCT ACGGCGCGCG GGTTTCGCTT
CTGATCGGCG CAGTCGCTGC GCTGATTTCT GGCGTGATCG GCACCGCCAT GGGGGTTGCA
GCCGGGTATT TCGGCGGCAA GGTCGACGCG GTTGTGACCT TCCTCATAAA CGTGCGCCTG
GCGATGCCCG TGGTCCTGGT GGCGCTGGCT GTCGTGGCAA TCCTTGGCGG GTCTTTGACG
GTCGTGGTCT GCGTGCTCGG CCTATTGTTG TGGGACCGAT TTGCCGTGGT GATGCGGGCG
TCGACCTTGC AGGTCAGCCG TCGCGACTAC GTGGCCGCCG CTCAGGTGAT CGGAGCCTCG
ACCCCGCGCA TCCTCTTGAC CGAGATCATG CCAAATATCT TCAACAACCT GATCGTGGTG
ATCACGCTGG AGATGGCCCA TGCGATCCTG CTCGAAGCGG CACTGAGCTT CCTTGGTCTA
GGCGTGCAAC CGCCGACCCC TTCGTGGGGT CTGATGGTGA GCGAAGGCAA AAACATGATG
TTGTTTGAGC CTTGGCTGGT TCTCATTCCC GGCGCCGTTT TGTTCCTGCT TGTGCTGGCA
ATCAATCTCA TGGGCGATGG TCTGCGCGAC GTCACCGCCC CCGAAGGACG GAGCTGA
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| Protein sequence | MTDATDPLYQ EIQGPTPRQM LKTRALGHKG LIFGLCVVGL LVVIALLAPV LAPHNPYEQS
LMNRMVPPVF LGGTWEHPLG TDHLGRDYLS RLIYGARVSL LIGAVAALIS GVIGTAMGVA
AGYFGGKVDA VVTFLINVRL AMPVVLVALA VVAILGGSLT VVVCVLGLLL WDRFAVVMRA
STLQVSRRDY VAAAQVIGAS TPRILLTEIM PNIFNNLIVV ITLEMAHAIL LEAALSFLGL
GVQPPTPSWG LMVSEGKNMM LFEPWLVLIP GAVLFLLVLA INLMGDGLRD VTAPEGRS
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