Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3596 |
Symbol | |
ID | 4075523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 644593 |
End bp | 645138 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638005115 |
Product | redoxin |
Protein accession | YP_611825 |
Protein GI | 99078567 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.723632 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCTG GACAAAAACT CCCCCAGGTG ACCTTCCGTA CCCGTGTTCG CGACGACAGC ATCGAGGGCC CAAACCCGTT CCGCTGGCAG GACATGACCA CTGCAGATTA CTTCGCGGGC AAGCGCGTGA TCCTGTTCTC GCTGCCGGGC GCGTTCACCC CGACTTGCTC GACCTACCAG CTGCCCGGTT TTGAGAACGG GTTTGAGGAT TTCAAGGCTG AAGGCATCGA CGAAATCTAC TGCATGTCCG TCAACGACAG CTTTGTGATG AACAAATGGG CCGAAGCGCA GGGCATCAAG AACGTCAAAG TGATCCCCGA CGGCTCTGGC GAATTCACCC GTAAAGTGGG CATGCTGGTC GCCAAGGACA ACCTCGGCTT TGGCATGCGT TCCTGGCGCT ATGCAGCCAT CATCAACGAT GGGGTTGTAG AAGCGTGGTT CGAAGAGCCG GGCCGCGATG ACAACCACGC AGAAGATCCG TATGGCGAAT CCGCGCCCGA GAACCTGCTG AAGCACCTCA AGGAAAAAGT CTCCGAAGCG GCCTGA
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Protein sequence | MFAGQKLPQV TFRTRVRDDS IEGPNPFRWQ DMTTADYFAG KRVILFSLPG AFTPTCSTYQ LPGFENGFED FKAEGIDEIY CMSVNDSFVM NKWAEAQGIK NVKVIPDGSG EFTRKVGMLV AKDNLGFGMR SWRYAAIIND GVVEAWFEEP GRDDNHAEDP YGESAPENLL KHLKEKVSEA A
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