| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3593 |
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| Symbol | |
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| ID | 4075520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 641900 |
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| End bp | 642703 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005112 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_611822 |
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| Protein GI | 99078564 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.520657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC CGCAGATTAC AGATAGCCAT TGCCACCTCG ATTTCCCTGA TTTCGAGGGA
GAACTCCCCG AGGTTCTGGC GCGCGCGGCG GAGGCAGGCG TCACCCGTAT GGTGACTATC
TGTACCAAGC TCAAAAACGA AGCCGCCGTG CGTGCGCTCG CTGAGAAGTA TGAACCAGTA
TTCTACGCCG CCGGAACTCA TCCCATGAGC GCCGCGGACG AACCTCTGGT CTCGGTCGAG
GAATTGGTAG CCCTCGCGCA GCATCCAAAA TTCGTTGGCA TCGGCGAGAC GGGCTTGGAT
TACCACTACA CGGCCGACAG CGCCGAGATC CAGAAACGCA GCCTCTCGAT TCACATCGAG
GCGGCGCAGG AAACCGGATT GCCGCTTATT ATCCACGCCC GGGCCGCGGA TGACGATATG
GCGCGAATCC TTCGCGAGGC CTATGCCGTA AAGGAATACT CCTGCGTTAT GCATTGCTTC
TCGTCCTCCG CATCACTTGG ACGTGCAGCG CTGGATCTTG GGTTTTATCT CTCGATGTCC
GGGATCGCGG CTTTCCCCAA GAGCCAAGAG CTGCGCGATA TTTTTGCCGA AGCACCCATT
GATCGCGTTT TGGTGGAAAC CGACAGCCCC TATCTCGCAC CGCCGCCCTA TCGCGGCAAA
CGCAATGAAC CGGCCTATAC AGCGCATACG GCCAAGGTCG GAGCCGAGGT CTTTGGTCTC
GAATACGCCG AGTTCGCGGC CCGTACACAG GAAAACTTTG ACCGGCTGTT CTGGAAGGCC
GCGCAATATG AGGCCGCTGC CTGA
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| Protein sequence | MTTPQITDSH CHLDFPDFEG ELPEVLARAA EAGVTRMVTI CTKLKNEAAV RALAEKYEPV
FYAAGTHPMS AADEPLVSVE ELVALAQHPK FVGIGETGLD YHYTADSAEI QKRSLSIHIE
AAQETGLPLI IHARAADDDM ARILREAYAV KEYSCVMHCF SSSASLGRAA LDLGFYLSMS
GIAAFPKSQE LRDIFAEAPI DRVLVETDSP YLAPPPYRGK RNEPAYTAHT AKVGAEVFGL
EYAEFAARTQ ENFDRLFWKA AQYEAAA
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