| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3591 |
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| Symbol | |
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| ID | 4075518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 640077 |
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| End bp | 640721 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005110 |
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| Product | thymidylate kinase |
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| Protein accession | YP_611820 |
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| Protein GI | 99078562 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.389295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACCCAAA ACCAAGGCTC CGGCCTCTTT CTGACCTTCG AAGGCATCGA CGGGTCGGGT
AAATCGTCTC AATGCCGCCT GCTGGCGGAG CATTTGCGCG GGCTGGGCCG CGAGGTCGTG
CTGACGCGTG AACCGGGCGG ATCAGAGGGC GCCGAGGAAA TTCGCCGTCT CGTGCTGGAG
GGCGACCCGG ACCGCTGGTC GGCAGAGACG GAAATCCTAT TGTTCACAGC GGCGCGGCGC
GACCATCTGG AGCGGACGAT CCTGCCTGCG CTTTCGGCAG GCAAGGTTGT CATCTGCGAC
CGGTTCGCGG ATTCCACCCG CATGTATCAG GGGCTTTCGC GCGGGGACCT GCGTGCCACC
GTGGACGAGC TTCATGCGCT GATGATCGGG CGGGAGCCAG ATGTGACGAT CCTCATTGAT
ATGGATCCCG AAACCGGTCT TGCGCGGGCC AAGGGGCGTC AGGGCACCGA AGAGCGTTTT
GAGGATTTTG GCCTCGCATT ACAGGAAAAA ATGCGGGCGG GGTTCTTGGC GCTCGCCGAT
GAATTTGCTG ACCGTTTCCG CATTGTGGAT GGCGCCCGTG ATATGGATGC GGTTGCAGCG
GATGTTGCGC GCATTGTCGA GGCGGAGCTG GAACAGCGCG TATGA
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| Protein sequence | MTQNQGSGLF LTFEGIDGSG KSSQCRLLAE HLRGLGREVV LTREPGGSEG AEEIRRLVLE
GDPDRWSAET EILLFTAARR DHLERTILPA LSAGKVVICD RFADSTRMYQ GLSRGDLRAT
VDELHALMIG REPDVTILID MDPETGLARA KGRQGTEERF EDFGLALQEK MRAGFLALAD
EFADRFRIVD GARDMDAVAA DVARIVEAEL EQRV
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