| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3568 |
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| Symbol | |
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| ID | 4075490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 608968 |
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| End bp | 609945 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005082 |
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| Product | pyridoxal-5'-phosphate-dependent enzyme, beta subunit |
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| Protein accession | YP_611799 |
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| Protein GI | 99078541 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0781846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0456931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCCC TTGCCATGAT CGAAGCCGCC GCCGCGCGGC TCAAAGGACA CGCCCGCTAC
ACGCCGCTTC TGTCTTCGCC CTTCCTGGAC GAGATCGCCG GACGCCGGGT CTTTGTAAAG
GCGGAATGCC TGCAGCACAC CGGTTCGTTC AAATTTCGCG GCGGCTGGGC CGCGCTTTCG
GCCATGGATC CTGAACTGCG CAAACGGGGT GTGATCGCCT ATTCCTCTGG CAATCATGCT
CAAGGTGTCG CCGCCGCCGC CAAGGCCCAT GGCGCCCCGG CCGTGATCGT GATGCCCGCG
GATGCACCAC AGCTCAAAAT CGACAACACC CGCGCGCTCG GCGCTGAGGT GGTATTGTAT
GATCGGGTCG CAGGGGAAAG CCGCGAAGCC GCTGCAGAGC CTCTGGTCGC CGAACGTGGC
CTGACACTCA TCAAACCCTA TGACGAACCG GAAGTGATCG CAGGCCAGGG CACAACCGGG
CTCGAGATCG CGGAACAAGC TGCCGCAGAA GGTGTCACAA AGGCCGACGT GCTGGTCTGC
TGTGGCGGCG GGGGCCTCAC ATCCGGCATC GCTCTCGCGC TTGAGGCCCA TGCCCCGAAC
ATGCGGGTCC GCCCCGCAGA GCCAGAGGGC TTTGACGATG TCGCACGCTC GCAATCGTCG
GGTCAAATTG AAACGAACCC TGCCCCCACG GGGTCGATTT GCGACGCAAT CCTCACCCCC
GCCCCGGGCG ACATCACCTG GCCCCTGCTC TCACGCCTCT GCGGCCCGGG CCTCACCGTC
ACCGATGATC AGGCCCTTGA GGCCATGGCG ATCGCCTTTC AACGCCTCAA GATCGTACTG
GAACCCGGCG GTGCCGTGTC CCTGGCCGCA GCACTGTTTC ACCCGGACCA AATCGACGGC
GATGCCGTGA TCGCGGTTGC AACAGGCGGC AATGTCGACC CGGGTCAGTT CACCGCAGCT
CTTACTCGCT TCCTGTAA
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| Protein sequence | MTSLAMIEAA AARLKGHARY TPLLSSPFLD EIAGRRVFVK AECLQHTGSF KFRGGWAALS
AMDPELRKRG VIAYSSGNHA QGVAAAAKAH GAPAVIVMPA DAPQLKIDNT RALGAEVVLY
DRVAGESREA AAEPLVAERG LTLIKPYDEP EVIAGQGTTG LEIAEQAAAE GVTKADVLVC
CGGGGLTSGI ALALEAHAPN MRVRPAEPEG FDDVARSQSS GQIETNPAPT GSICDAILTP
APGDITWPLL SRLCGPGLTV TDDQALEAMA IAFQRLKIVL EPGGAVSLAA ALFHPDQIDG
DAVIAVATGG NVDPGQFTAA LTRFL
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