Gene TM1040_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3554 
Symbol 
ID4075475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp599009 
End bp599191 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content56% 
IMG OID638005067 
Producthypothetical protein 
Protein accessionYP_611785 
Protein GI99078527 
COG category[S] Function unknown 
COG ID[COG3024] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.179215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGCC CCATCTGCGG CAAGCCCACC CAGCAGAGTG TTCGCCCGTT TTGCAGCAAG 
CGCTGCGCCG ATCTTGACCT CGCAAAATGG CTCAATGGCG CTTACGCGGT CCCAAGCGAA
GACCAAGAAG ACCTTGAAAA CGCTCTAGAA GACCAAAAAA ACCTCCCCCC CACGGAACAT
TAG
 
Protein sequence
MSCPICGKPT QQSVRPFCSK RCADLDLAKW LNGAYAVPSE DQEDLENALE DQKNLPPTEH