| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3512 |
|---|
| Symbol | |
|---|
| ID | 4075191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008043 |
|---|
| Strand | - |
|---|
| Start bp | 549097 |
|---|
| End bp | 549984 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638005027 |
|---|
| Product | succinyl-CoA synthetase (ADP-forming) alpha subunit |
|---|
| Protein accession | YP_611746 |
|---|
| Protein GI | 99078488 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCC TCATCGACGA AAACACCAAA GTCATCTGTC AGGGCCTCAC CGGCTCTCAG
GGCACCTTCC ACACCGAACA GGCCATCGCT TATGGCACCA AGATGGTCGG CGGCGTGACC
CCCGGCAAAG GCGGTCAGAC CCACCTTGAC CTGCCGGTTT TCAACTCCGT GCATGAAGCC
AAGCATGTAA CCGAAGCCAA CGCCTCGGTG ATCTATGTGC CACCGCCGTT TGCAGCGGAC
TCCATCCTCG AGGCGATCGA CGCCGAGATG GAACTCATCG TCTGCATCAC CGAAGGCATC
CCGGTTCTGG ACATGATGAA GGTGCAGCGC GCCCTCGAAG GCTCCAAATC GCGCCTCATC
GGCCCCAACT GCCCCGGCGT CATCACCCCG GATGCCTGCA AGATCGGCAT CATGCCAGGC
CACATCCACA AGCGTGGTTC TGTTGGTGTT GTGTCCCGTT CCGGCACCCT GACCTACGAG
GCCGTGAAGC AGACCTCTGA CATCGGTCTG GGCCAGTCCT CGGCAGTTGG CATCGGCGGC
GACCCGATCA AGGGCACCGA GCATATCGAC GTCCTTGACA TGTTCCTCGA CGATGATGAG
ACCCAGTCCA TCATCATGAT CGGTGAGATC GGTGGCTCTG CCGAAGAAGA AGCGGCGGAA
TTCATCGCCG AGCAGAAGAA AAAAGGCCGT TGGAAGCCGA TTGCGGGCTT CATCGCAGGC
CGTACCGCCC CTCCGGGCCG CCGCATGGGC CACGCGGGCG CGATTGTCGC CGGTGGCAAA
GGTGGCGCCG AAGACAAGAT CGAAGCGATG AAATCCGCAG GCATCGTTGT TGCCGACAGC
CCCGCCACCC TGGGCGAAGC GGTTCAGAAA GCGATTGCAA ACGGCTGA
|
|---|
| Protein sequence | MAVLIDENTK VICQGLTGSQ GTFHTEQAIA YGTKMVGGVT PGKGGQTHLD LPVFNSVHEA
KHVTEANASV IYVPPPFAAD SILEAIDAEM ELIVCITEGI PVLDMMKVQR ALEGSKSRLI
GPNCPGVITP DACKIGIMPG HIHKRGSVGV VSRSGTLTYE AVKQTSDIGL GQSSAVGIGG
DPIKGTEHID VLDMFLDDDE TQSIIMIGEI GGSAEEEAAE FIAEQKKKGR WKPIAGFIAG
RTAPPGRRMG HAGAIVAGGK GGAEDKIEAM KSAGIVVADS PATLGEAVQK AIANG
|
|---|
| |