| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3483 |
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| Symbol | |
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| ID | 4075123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 514420 |
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| End bp | 515673 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004998 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_611717 |
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| Protein GI | 99078459 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTGC TGAAGGGAAC GGCCGCAGGA CTTGCGATGG CCGTCGGGCT GGCCGCATCT
GCTCAGGCAT CGGAGCTGAC CGGAACGCTC AAGATTTTCT CGGATATGTC GAACCCGGCA
CCGCGCGCGG TGATGGAGAA GATGGCGTCC GATTTTGATG CACTGCATCC CAATCTGAAA
GTCGAACTGA CCGTCATCGA CCGCGAAGCC TACAAGACCC AGATTCGCAA CTTCCTGACC
GCCAATGCGC CGGATGTTGC CAACTGGTAC GCTGCCAACC GCATGCGCCC CTATGTGTCG
GCCGGTCTCT TTGAGGATGT CTCTGACCTC TGGGCAGAGC CTGCGATTGC GGAAAACCTT
GCGTCCACCA AGGGCGCGAT GACGCTTGAT GGCAAGCAGT GGGGCGTGCC CTATACCTAC
TATCAGTGGG GCGTCTACTA CCGCGAGGAC ATCTACAACG AACTGGGTCT CGAAGAGCCA
AGCGACTGGG CAACCTTCAA GTCCAACTGC CAGAAGATTC TCGACTCGGG CCGCAAGTGC
TTCACCATTG GTTCCAAGTT CCTCTGGACC GCCGGCGGCT GGTTTGACTA TCTGAACATG
CGTACCAACG GCTACGACTT CCACATGGCG CTGACCAATG GGGACGTGGA ATGGACCGAT
GACCGAGTGA AGCAAACCTT TGCCAATTGG CGCGAGCTGA TCGACATGGG CGCCTTTATC
GACAACCACC AGTCCTACAG CTGGCAGGAG GCGCTGCCCT TCATGGTGAA TGGTGAAGCG
GCGGCCTACC TCATGGGGAA CTTTTCCGTG GCCCCGCTGC GCGAAGCGGG TCTGAGCGAC
GAGCAACTTG ATTTCTACCA GTTCCCGGCG ATCAACCCGG ATGTCGAGCT GGCCGAAGAT
GCGCCGACCG ATACGTTCCA CATCCCGTCC GGGGCCCAGA ACAAGGAAGC GGCGCGTGAG
TTCCTGCGCT ATGTGGTCTC TGCGGACGTG CAGACCGCGA TCAATGCGGG CGACGCACTT
GGGCAGCTGC CGGTCAATGC CTCTTCCTCG GTGGATGATG ACGAGATGCT GAACCAGGGC
TTCGAGATGC TCTCCTCCAA CAGCCCCGGC GGTATCGCGC AGTTCTTTGA TCGCGACGCC
CCGGCCGAGA TGGCCTCGGT GGCGATGGAA GGCTTCCAGG AGTTCATGGT GTTCCCCGAC
AATCTCGACG ACATCCTGAA CCGTCTCGAG AAGGCCCGTC AGCGGATCTA CTAA
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| Protein sequence | MNLLKGTAAG LAMAVGLAAS AQASELTGTL KIFSDMSNPA PRAVMEKMAS DFDALHPNLK
VELTVIDREA YKTQIRNFLT ANAPDVANWY AANRMRPYVS AGLFEDVSDL WAEPAIAENL
ASTKGAMTLD GKQWGVPYTY YQWGVYYRED IYNELGLEEP SDWATFKSNC QKILDSGRKC
FTIGSKFLWT AGGWFDYLNM RTNGYDFHMA LTNGDVEWTD DRVKQTFANW RELIDMGAFI
DNHQSYSWQE ALPFMVNGEA AAYLMGNFSV APLREAGLSD EQLDFYQFPA INPDVELAED
APTDTFHIPS GAQNKEAARE FLRYVVSADV QTAINAGDAL GQLPVNASSS VDDDEMLNQG
FEMLSSNSPG GIAQFFDRDA PAEMASVAME GFQEFMVFPD NLDDILNRLE KARQRIY
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