Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3480 |
Symbol | |
ID | 4075120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 511757 |
End bp | 512116 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638004995 |
Product | response regulator receiver protein |
Protein accession | YP_611714 |
Protein GI | 99078456 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.185259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGGAAC TCAAGCGTCT TCAGAAGGAC AACGACCGGC TTTGGCGCGA AGTGTCGGAA CTGGCACTGG ACACGTTGAT CCTGTCCGAG TCGGCGATTG AGGAGCTTGA GCGGTGTGAC AGGCTACCGG AGCTTATTCT TCTGGACATC AACATGCCCC GAATGAACGG CTTTGAGTTC CTGGAGATTG TCGATGAGAA GTTGAGCCAG GCGCAACCGC CAGTCAAAGT TGCTCTTTTG ACGACGTCAA GCAATCCCGC GGATGCACGC AAGGCTGAGT CATTTGCGTC AGTCGGCTGG TTTCTGTCGA AGCCCTTGGG ACGAGATATG CTGGACCAAC TTGTTTCCGA GTTCTCGTGA
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Protein sequence | MQELKRLQKD NDRLWREVSE LALDTLILSE SAIEELERCD RLPELILLDI NMPRMNGFEF LEIVDEKLSQ AQPPVKVALL TTSSNPADAR KAESFASVGW FLSKPLGRDM LDQLVSEFS
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