Gene TM1040_3480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3480 
Symbol 
ID4075120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp511757 
End bp512116 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content54% 
IMG OID638004995 
Productresponse regulator receiver protein 
Protein accessionYP_611714 
Protein GI99078456 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.185259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGAAC TCAAGCGTCT TCAGAAGGAC AACGACCGGC TTTGGCGCGA AGTGTCGGAA 
CTGGCACTGG ACACGTTGAT CCTGTCCGAG TCGGCGATTG AGGAGCTTGA GCGGTGTGAC
AGGCTACCGG AGCTTATTCT TCTGGACATC AACATGCCCC GAATGAACGG CTTTGAGTTC
CTGGAGATTG TCGATGAGAA GTTGAGCCAG GCGCAACCGC CAGTCAAAGT TGCTCTTTTG
ACGACGTCAA GCAATCCCGC GGATGCACGC AAGGCTGAGT CATTTGCGTC AGTCGGCTGG
TTTCTGTCGA AGCCCTTGGG ACGAGATATG CTGGACCAAC TTGTTTCCGA GTTCTCGTGA
 
Protein sequence
MQELKRLQKD NDRLWREVSE LALDTLILSE SAIEELERCD RLPELILLDI NMPRMNGFEF 
LEIVDEKLSQ AQPPVKVALL TTSSNPADAR KAESFASVGW FLSKPLGRDM LDQLVSEFS