| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3454 |
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| Symbol | |
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| ID | 4075088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 477138 |
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| End bp | 477878 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638004963 |
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| Product | NLP/P60 |
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| Protein accession | YP_611688 |
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| Protein GI | 99078430 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG CCCGCATTGA CCGCCCCGTC GTCGATCTGT GCGCGGCTCC TGCGGGCGCC
CGCGATCGAC AGCTGCTGCT TGGCGACACC GTCGAGATCC TCGCGACCTC TGACGGCTGG
TGCCACCTGC GTGCCGAAAA AGACGGCTAT CAGGGCTGGG TTCCGGGGAC CGCCCTGGCA
GAGCCATTGA CGCCGACCCA CTGGGTCAGC GCCCCGGCGA CCCACGCCTA CACAAAGGCG
GATTTCAAAT CGCCGGACCT TGTGTCGCTC AGCCTCGGCA GCCAGGTGGT GGTGAGCGGT
TCTGAGGGGC GATTTGCACA GACTGATCAA GGGTTTGTGC CGCTGGCGCA TCTCATGCCG
CTGGCGCAGC GCGCGTCCGA TCCCGTGGCC GTGGCCGAAA CGCTTTTGGG CACACCGTAT
CTCTGGGGGG GCAACAGTCG CTTTGGCATT GATTGCTCGG GGCTGGTGCA GCTTTCCTGT
CATGCCTGCG CGATTGCCTG CCCCGGTGAC AGCGGACCGC AGGAAACCGC GCTTGGGCAG
ACCTTGCCAG ATGGCACCCC CTATGAACGG GGCGATTTGC TGTTCTGGAA AGGCCATGTG
GGCTGGGTGC GCGACCCGCT CACGCTGCTG CATGCCAACG CTTTTTCGAT GGCGGTGACG
CTGGAGCCGC TTCAATCCGC GATCACCCGT ATCGCAGAAC AGGGCGACGG GCCGGTAACG
GCGCATAAAC GCCTGACCTG A
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| Protein sequence | MTRARIDRPV VDLCAAPAGA RDRQLLLGDT VEILATSDGW CHLRAEKDGY QGWVPGTALA
EPLTPTHWVS APATHAYTKA DFKSPDLVSL SLGSQVVVSG SEGRFAQTDQ GFVPLAHLMP
LAQRASDPVA VAETLLGTPY LWGGNSRFGI DCSGLVQLSC HACAIACPGD SGPQETALGQ
TLPDGTPYER GDLLFWKGHV GWVRDPLTLL HANAFSMAVT LEPLQSAITR IAEQGDGPVT
AHKRLT
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