| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3451 |
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| Symbol | |
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| ID | 4075085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 475100 |
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| End bp | 475750 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004960 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_611685 |
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| Protein GI | 99078427 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.6413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAACC AACACGCTTC TGCGGTGCGC AGAGGGCGGA AGTTTGACCA GGTGCTGGAT
GGGGCGCGCA AGGTCTTTTT GACAGACGGG TTTGAAGGCG CAAGCGTCGA CGATATCGCG
CGCGAGGCAG GCGTGTCCAA GGCGACGCTT TATAGCTATT TCCCCGACAA ACGCCTGTTG
TTCATGGAAG TGGCGCATAG CGAGTGCGCC CGCCACGCCA CCCAGCAGCT CGACATCCCC
GCCGGCTCCA GCCCGCGCCA GGTGCTGACG CAGGTTGCGC GCCATATACT GCGGGTGATC
CTGTCGGATG TGGGCCAGAA GATCTATCGG ATCTGCGTGG CAGAGACCGA GCGCTTCCCG
GATCTTGGAC GTGAGTTCTT TGCCAGTGGC CCGAAGGTGG AGCGCGAGAG GTTCAAGGAA
TACCTGCAGG CCGCAACCGC ACGCGGGGAG TTGCGGATCG AGGATTTTGA TCTGGCGGCG
GAACAATGGG CGGCGCTTTT GCGCATGGAT CTGTTCCCGC GGATGATCTT CAATCTGCGC
GACAGCGTGA CGGACTCCGA GATCAACCGC GTGGCCGAGG GTGCCGTGGA TATGTTCCTC
GCCTGCTATG GCGTTTCTCA GGCCGGGGAC GCCGCCTCTG ATCGACCCTA A
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| Protein sequence | MTNQHASAVR RGRKFDQVLD GARKVFLTDG FEGASVDDIA REAGVSKATL YSYFPDKRLL
FMEVAHSECA RHATQQLDIP AGSSPRQVLT QVARHILRVI LSDVGQKIYR ICVAETERFP
DLGREFFASG PKVERERFKE YLQAATARGE LRIEDFDLAA EQWAALLRMD LFPRMIFNLR
DSVTDSEINR VAEGAVDMFL ACYGVSQAGD AASDRP
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