Gene TM1040_3422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3422 
Symbol 
ID4075596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp445506 
End bp445916 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content54% 
IMG OID638004931 
ProductWxcM-like 
Protein accessionYP_611656 
Protein GI99078398 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0396977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.668724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTT CAAAGTGCCG GATCATCGAC CTCCCACGCA TAGCGGATGC CCGTGGCAAT 
CTGACCTTCA TTGAAGGGCA AAACCACATC CCGTTCGACA TCAAGCGTGT CTACTATCTC
TACGATGTGC CAGGCGGGTC CGACCGCGGG GAGCACGCGC ACAAGAACCT GCATCAATTC
ATGGTCTGCA TGTCGGGTAG TTTTGATGTG TGTCTGGACG ACGGTTTCGA GAGCAAGCGC
ATTCAGCTCA ACCGGTCTTA TTTTGGCATC TACATCTGTC CAATGATCTG GCGGTATCTG
GACAATTTCT CCTCAGGTGC GGTTTGCATG GTGCTCGCTT CCGAGCCATA TGACGAGGCG
GATTATATCC GGGATCGGGA TGAGTATCTC CGCGCGGTGC GCGCGTCATG A
 
Protein sequence
MSISKCRIID LPRIADARGN LTFIEGQNHI PFDIKRVYYL YDVPGGSDRG EHAHKNLHQF 
MVCMSGSFDV CLDDGFESKR IQLNRSYFGI YICPMIWRYL DNFSSGAVCM VLASEPYDEA
DYIRDRDEYL RAVRAS