| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3410 |
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| Symbol | |
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| ID | 4075584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 431965 |
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| End bp | 432822 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004919 |
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| Product | NmrA-like |
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| Protein accession | YP_611644 |
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| Protein GI | 99078386 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.630504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.478679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCA AGCCAATCCT TATCACAGGC GCGACCGGAA AAACCGGATC TCGCGTTATG
GGCCGGCTCA AATCTTTGGG GTTTGATGCG CGCTCAGGCT CGCGCAAGGC GCCCGTTCCC
TTTGATTGGG ACAATCCTGC CACATGGGAG AAGGCCCTGC GCGGCATTGG GGCCGTCTAC
GTCAACTATC ATCCGGACTA TGCATTCCCC GGCGCCATCG CCAACCTAAC ACGCTTCACC
CGTGTGGCGG CCTCCTGCGG TATTGAGCGC TTGGTCATTC TGACAGGTCG TGGTGAACAC
CATGCGCAAC TTGGCGAGGC GGTCGTAGCA AAATCGGGCC TGGACTACAC GATCGTTCGC
TCTGCTTGGT TTGCGCAAAA CTTCTCTGAG GGCGCCCTTT GGGAACCTGT GATGGAAGGT
GTGGTACCGA TGCCGGGCGC AAACCTTGCA GAACCGATCA TCGACATTGA TGACCTCGCC
GATGTCATTG CGGTGTCTCT CACAGGCGAA GGCCACTCCG GACAGACTTA CGATTGTACA
GGTCCGCGGC TGCTCGACTT TGCGGAGGTC GCTGACATTT TGTCCGGCGC GATGGGGCGA
CGCGTCAACT ATCTGCCGAT CTCGTTCGAT GACTTTCATG CAGAGCTCGC GGCGACAAGC
GGCACAGTCT TTGCCGACAT CGTCACAGGC ATTGCTCGAG AAACCTTCGA CGGGCGCAAT
GCCGTGCTTG GCGACGGCGT GATGCGCGCG CTTGGTCGTC AACCGCGGGA CTTCACCGAA
TTTGCGCAAT CAGCCGCGTT GGCGGGCAAG TGGGCCAACG CGGCCTGGGA AATGAAAACA
AACAGGAGCA CATCATGA
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| Protein sequence | MASKPILITG ATGKTGSRVM GRLKSLGFDA RSGSRKAPVP FDWDNPATWE KALRGIGAVY
VNYHPDYAFP GAIANLTRFT RVAASCGIER LVILTGRGEH HAQLGEAVVA KSGLDYTIVR
SAWFAQNFSE GALWEPVMEG VVPMPGANLA EPIIDIDDLA DVIAVSLTGE GHSGQTYDCT
GPRLLDFAEV ADILSGAMGR RVNYLPISFD DFHAELAATS GTVFADIVTG IARETFDGRN
AVLGDGVMRA LGRQPRDFTE FAQSAALAGK WANAAWEMKT NRSTS
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