| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3386 |
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| Symbol | |
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| ID | 4075285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 402659 |
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| End bp | 403693 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004894 |
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| Product | malate/L-lactate dehydrogenase |
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| Protein accession | YP_611620 |
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| Protein GI | 99078362 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2055] Malate/L-lactate dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.188787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA GACAAGAAAG AACAGAGATG ACCGCCACCG AAACACTCAC GCTCTCGGAA
ATCGAAAGCC TTGCCTTTGA TGCACTGGTT GCAGCGGGCA CCTCACCCGC AAACGCCCGC
CCTCTGGCAG TTGCAACCGC GATGACCGAA GCCGATGGGG TCGCCTCGCA CGGGCTGGCC
TATATCCCGA TCTATGCCCA GCATGTTGAA TGCGGCAAAG TCGACGGACA GGCCAACCCC
AAGGTCGCAC ACCCTCGACC CGCAGTGATC ACCGTGGACG CAGCCACCGG ATTTGCACAT
CGTGCGATCG ACCTCGGCTT TGAGCAGTTG ATCCCTCTGG CCAAGGAAAT GGGTGTCGCG
GTGCTGGCCG TGAACAACTC CTACAACTGT GGTGTTCTGG GGGTTCACAC GCAAAGGCTG
GCGCAGGCTG GGCTGATGGG GTTTGGCTTT ACCAATGCCC CTGCCTCGAT TGCGCCCTCG
GGTGGCGCAA AGCCTGTGGT GGGCACCAAT CCATTTTCAA TCTCGGCGCC GGGTTCAGAT
GGCACTGCGG CTCTGCTCAT TGATCAATCC GCCAGCACGA TTGCAAAGAG CGAAGTGATG
AAACACGCCC GTGAAGGCAA GCCGGTCCCA CAAGGCTGGG TGCTGGACGC CGATGGCCAG
CCCACCATCG ATCCCGATGC AGGCCTCAAA GGGTCAATGG TGCCGTCCGG CGGATACAAA
GGCGTGGGCA TTGCCCTGAC CGTCGAGCTT CTGGCAGCGG CCATGACCGG CGCAACCCTG
GGCGCGGTGG CGAGCCCGTT TTCCGGCACA GCGGGCGGTC CGCCCAAAAC CGGCCAGTTC
TTTATCGCCA TAGACCCGGA CGCTACATCC GGGGGGCTCT TTCAGGAAAA GCTCGCGGAT
TTGATTTCGG CATTTCGTGA TCAAGATGGC GCACGTCTGC CAGGAGATGG TCGCCAATCC
GCCCGTCTCC GGGCCGCCAC CGAGGGCGTG AGGGTGAACG CCGCCCTACT GGAGCGCGTG
CGCGCCCTCA TCTAA
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| Protein sequence | MSDRQERTEM TATETLTLSE IESLAFDALV AAGTSPANAR PLAVATAMTE ADGVASHGLA
YIPIYAQHVE CGKVDGQANP KVAHPRPAVI TVDAATGFAH RAIDLGFEQL IPLAKEMGVA
VLAVNNSYNC GVLGVHTQRL AQAGLMGFGF TNAPASIAPS GGAKPVVGTN PFSISAPGSD
GTAALLIDQS ASTIAKSEVM KHAREGKPVP QGWVLDADGQ PTIDPDAGLK GSMVPSGGYK
GVGIALTVEL LAAAMTGATL GAVASPFSGT AGGPPKTGQF FIAIDPDATS GGLFQEKLAD
LISAFRDQDG ARLPGDGRQS ARLRAATEGV RVNAALLERV RALI
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