| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3366 |
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| Symbol | |
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| ID | 4075265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 377231 |
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| End bp | 378076 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004874 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_611600 |
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| Protein GI | 99078342 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.633764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAG AACTCACCAC CCGACAGGTT TTCTCCTATG TATTCAGAGA TGCCACACCA
AGAAAAACGC TAGTGATCTG CCTGGCTGGT ACTCTGGTCT GTGCAGTTCT GTTGGCGCTT
TTTGAGCCTC GTGCGAGTCG GGATCTGCCG TTTTTATGGG CCCTATTTCA CTGGGCCGCA
CATCTTGCCG GAGGGCTGGG GGTCCTGATT GCAGTCTACC TAACCGCTCA GCGTGCGGGG
TTATCGGATC GCTGGCGGGT CGCGTTGGCG GTTGCAGCTC TACCTTTTGG GGTGGCATTT
CTTTCAGTGG GGATCGAGAC ACTCATTGCC GCCGCAATCG GGGAGCCGCA GTTTCGAGCG
GATGGCTATT GGGAAGAGCT GCAACATGTT GCCTTGCCCG CTATAAGTTT GACCTCTGTC
GCGCTTCTTG CGGTTTTCAA GGCGGTGGAG ATGGCCTTTG CGCGCCAATC GGAGATCCTG
TCGCGTTTTG CAAAGAAGCC CTCGCTCCGG ACTCTGTTTC CAGAACTTCC CGCCGCGCTG
GGCGAGGATC TGGTCAGCGC AAGCGCGAAT GATCACTACG TCCATCTGCG AACGACTGAG
GGCAGCGCCA TGCTCAGTCG GCGATTTTCG GATTGTGTCG AGCAATTGTC CGCGTTTGAC
GGGGTGCAGG TGCACCGTTC ACATTGGGTC CACCTCGCGC ATGTGTCGCA TGTGCGCACC
AACGGGAGCA GCTATCTCTG CTCCATGCTG GACGGAACGG AGATTCCTGT CAGCCGCCGC
AAACACGCGG ACCTTAAGCT CAGCCTCCAA CACTTCACAA AAACAGCGCG CCGCGACACG
ATCTGA
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| Protein sequence | MKTELTTRQV FSYVFRDATP RKTLVICLAG TLVCAVLLAL FEPRASRDLP FLWALFHWAA
HLAGGLGVLI AVYLTAQRAG LSDRWRVALA VAALPFGVAF LSVGIETLIA AAIGEPQFRA
DGYWEELQHV ALPAISLTSV ALLAVFKAVE MAFARQSEIL SRFAKKPSLR TLFPELPAAL
GEDLVSASAN DHYVHLRTTE GSAMLSRRFS DCVEQLSAFD GVQVHRSHWV HLAHVSHVRT
NGSSYLCSML DGTEIPVSRR KHADLKLSLQ HFTKTARRDT I
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