| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3348 |
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| Symbol | |
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| ID | 4075247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 359443 |
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| End bp | 361311 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004856 |
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| Product | thiamine pyrophosphate enzyme, central region |
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| Protein accession | YP_611582 |
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| Protein GI | 99078324 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3962] Acetolactate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0194169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.142166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCGC AAGACGACAC CATCCGCCTG ACCACAGCAC AGGCCATCAT CCGCTGGCTG
TGCAACCAGT ACATTGAAAT CGATGGCGAA GAGATGCGCC TGTGTGGCGG TGGCTTCGGC
ATCTTTGGAC ATGGCAATGT GACCTGTCTG GGCGAGGCGT TGAACACCGT CCGCGATGCG
CTTCCGCTCT ATCGCGGACA GAATGAACAA AGCATGGGAT TTGCAGCTGC AGGATATGCC
AAGACCTGGT TACGGCAGCG GTTCATGTTC TGCACCGCAA GTGCGGGGCC GGGCACCGCC
AATCTCGTGA CGGCGGCAGG GCTGGCTCAT GCCAATCGCT TGCCGATGCT GATGCTCTGC
GGAGATACCT TCCTCACCCG CCTGCCGGAC CCAGTTCTGC AACAAATGGA AAACTTCAAC
GATCCGACCT TTGGCGTGAA CGACGCGTTC AAACCGGTCA GCCGCTTTTG GGATCGAATC
TGCCATCCAG CACAGGTGAT TCAATCGCTC CCGGCTGCGA TTGCAACCAT GCTTGATCCG
GCGGATTGCG GCCCGGCCTT TATCGGCCTG CCTCAGGACG TGCAGGGCTG GACCTATGAT
TATCCAACTA AATTCTTTGA CAAAAAGGTA CATCGCATTC GCCGTCAGGC ACCAGATGCA
GATGAAATCG CAGATGCGGT CGCCGCGTTA GCCGCGGCGG AGCGCCCCAT CCTGATTGCA
GGTGGTGGCG TCCAATACTC TCGCGCCGCA GAAACACTCC GTGAATTTGC CGAGACCCAC
CAGATCCCGG TGGTCGAAAC CATCGCGGGC CGCGCCAATA TGCGGGCGAC ACACCCCCTG
AACATCGGCC CGATTGGGGT GACAGGGTCA GACAGCGCAA ATGCAATCGC GGAAAAGGCC
GATGTGATCG TCGCCGTTGG CACCCGGTTG CAAGACTTCA CCACCGGATC CTGGACAGCC
TTTTCAAAGG ACGCTCAGTT TATCTCGATC AACGCCGCGC GCCATGATGC AGGCAAGCAT
ATGTCCTTGC CAGTTGTGGG CGATGCCAAG TTGAGCCTCG CCGCAATCGA GGCCGCAACA
GACTACAATG CACCCCTAGA TTGGGTCGCT TATGCGCAGG ATCAGCGCAG CAAGTGGGAC
CGATATGTGG TCGAGAACAC CGCCCACGGC AATCGCCCTA ATTCCTATGC CCAGGCGATC
GGCGTCGTGA ACGACCTCTG CGATCCGCGC GACCGCGTAG TGGCCGCTGC GGGTGGGTTG
CCGGCTGAGG TCACAGCAAA CTGGCGCACG CTTGATATCG GCACGGTGGA TGTGGAGTTT
GGCTTTTCAT GCATGGGGTA CGAGATTGCT GGCGCCTGGG GCGCGCGCAT TGCTCAGTCG
CAGATGGAAC CCGATCAGGA TGTCATCACT TTCTGCGGGG ATGGCTCTTA TATGATGCTG
AACTCGGACA TTTATTCCAG TGTCCTCTCA GGCAAAAAAA TGATTGTTCT CGTGCTCGAC
AACGGAGGCT TTGCGGTCAT CAATAAACTG CAAAACAACA CAGGAAATCA GAGCTTTAAC
AACCTTCTTG CGGATTGCCC GACCATTGCA GAACCCTTCG GCGTGGATTT TGTCGCCCAT
GCCGCCTCGA TGGGGGCGAT GGCCGAAAAA GTCGCCAACC CGGCAGAACT AGGCGAGGCA
TTCAAACGCG CGAAGGCTGC CGACAAGACC TATGTGATCG TAATGGATGT GGACCCCTAT
GAGGGATGGA CCACCCAAGG GCATGCATGG TGGGAAGTCG GAACGCCCCA TATCACCGAG
GATGAAGCCG TCAGGACTGC GCATCTGGAC TGGGAGTCCT CGCGCAGCAA ACAGCGAAAG
GGCATCTGA
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| Protein sequence | MSAQDDTIRL TTAQAIIRWL CNQYIEIDGE EMRLCGGGFG IFGHGNVTCL GEALNTVRDA
LPLYRGQNEQ SMGFAAAGYA KTWLRQRFMF CTASAGPGTA NLVTAAGLAH ANRLPMLMLC
GDTFLTRLPD PVLQQMENFN DPTFGVNDAF KPVSRFWDRI CHPAQVIQSL PAAIATMLDP
ADCGPAFIGL PQDVQGWTYD YPTKFFDKKV HRIRRQAPDA DEIADAVAAL AAAERPILIA
GGGVQYSRAA ETLREFAETH QIPVVETIAG RANMRATHPL NIGPIGVTGS DSANAIAEKA
DVIVAVGTRL QDFTTGSWTA FSKDAQFISI NAARHDAGKH MSLPVVGDAK LSLAAIEAAT
DYNAPLDWVA YAQDQRSKWD RYVVENTAHG NRPNSYAQAI GVVNDLCDPR DRVVAAAGGL
PAEVTANWRT LDIGTVDVEF GFSCMGYEIA GAWGARIAQS QMEPDQDVIT FCGDGSYMML
NSDIYSSVLS GKKMIVLVLD NGGFAVINKL QNNTGNQSFN NLLADCPTIA EPFGVDFVAH
AASMGAMAEK VANPAELGEA FKRAKAADKT YVIVMDVDPY EGWTTQGHAW WEVGTPHITE
DEAVRTAHLD WESSRSKQRK GI
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