| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3344 |
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| Symbol | |
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| ID | 4075243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 355156 |
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| End bp | 356160 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004852 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_611578 |
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| Protein GI | 99078320 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000247508 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.28725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTTA CGTTGAAAGA GGTTGCAGAA CGTGCGGGGG TTTCCCGTTC TGCTGTATCG
CGCACCTTTA CCGACGGGGC CTCTGTGTCC GACAAGATGC GGCGCAAGGT TGAAAAGGCC
GCCCGCGAAC TGGGCTACAG CCCAAATGCG CTGGCCTCAT CGCTGACAAC AGGGCGCACC
AAGCTGATCG GGCTTGTCTC GAACAACTTT CACAACCCCA TCTTTCTCGA GGTCTTTGAT
CTCTTCACGC GCGGCCTTCA GGATCGGGGC TTGCGTCCAT TGCTTGTGAA CCTGACCGAT
GAAACAGACC CCGAGCATTC TGTGAATATG CTGCGCCAGT ATTCCGTCGA TGGGGTGGTT
GTGGCCTCGT CCACGTTGCC CCCGGGGTTT GCCAAGGCCT TTCGCGACGC AGGCGTGCCC
GTGGTTCATA GTTTTGGCAG ATCATCCTCG GCGCCTCAGG TGCATGTTGT TGGGATCGAC
AACGTTGAAT CGGGGCGCAT GGCGGCACGC GCGCTCATTG CGCGGAACTA TACGCATGTG
GCCTTTATGG GCGGTCCGGA AACTGCGACC TCCACGCAGG ATCGCCATGC AGGCTTCATG
TCGGAAATGT CCAAACACCC CAACATCCGG GCGACATACT CCTTCGCCGA GGCCTATTCC
TTTCAGGCGG GACGCTCCGA GATGATGAGG CTTCTACAGG CTGGGCCTGC CGAGGCGTAT
TTCTGTGGCG ACGACGTCCT CTCGATTGGT GCGCTCTCGG CCATCTCAGA CAGCGGCCTC
AGCGTACCGA AGGACATCGG CATCATCGGA TTGAATGATA TGGAAATGGC TGGTTGGGAG
AGCATCGACC TGACAACGGT TCATCAGCCG ATCCGACAAA TCGTCTCTTC ATCCATTGAA
TTGATGGTGG CGATGCTCGA TGAGCCGGAC CGCTATCCCG AGGCCCGCAT CTTTCCCTGT
TCGATTGTCG AGCGGGGCAC ATTGCGCCCC GCCCCCAAAA CCTAG
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| Protein sequence | MAVTLKEVAE RAGVSRSAVS RTFTDGASVS DKMRRKVEKA ARELGYSPNA LASSLTTGRT
KLIGLVSNNF HNPIFLEVFD LFTRGLQDRG LRPLLVNLTD ETDPEHSVNM LRQYSVDGVV
VASSTLPPGF AKAFRDAGVP VVHSFGRSSS APQVHVVGID NVESGRMAAR ALIARNYTHV
AFMGGPETAT STQDRHAGFM SEMSKHPNIR ATYSFAEAYS FQAGRSEMMR LLQAGPAEAY
FCGDDVLSIG ALSAISDSGL SVPKDIGIIG LNDMEMAGWE SIDLTTVHQP IRQIVSSSIE
LMVAMLDEPD RYPEARIFPC SIVERGTLRP APKT
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