| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3336 |
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| Symbol | |
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| ID | 4075235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 346296 |
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| End bp | 347858 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004844 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_611570 |
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| Protein GI | 99078312 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.490957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA AGTGGCGCCC GCGCCTCTGG ACTGTTGTCC TCCTGGTGCT GGCAATTGTG
CTGTGCCTTC CGATTGCCGG GCTGATCCTG TTTCGGTTCT ATGACAATCA GTTGGTGCAA
CAGACCGAAG AAAGCGTGCT GGCGCAGGCT GCGGTGATGG CGGCCACCTA TGCAGACCTT
TACAGCGAGG CTGCGGGGCT CGCCCCGCCA AAGCCAAAGC CCGTGTCGGC GCAAGACGCC
ATCTTTCCGT CGCTGTCAAT CAACAGCGCC ACCGTCTTGC CACCTCGTCC CGACGCGGCC
AACCCGTCAA CATCAGTGAC TGCAACTTAC CAGCGCCTCG CACCGCAACT CTCTCGGATC
GCAAGTTCAG CGCAAGCGCA AACACTTGCG GGCTATCGCT TCCTTGACAC GCAAGGCAAT
GTGATTGCTG GGACCGCCGA AATTGGCCGC GATCTGGGCC ACGTCAGCGA AGTCCGTGCC
GCCCTTGATG GTCATGTCGT TTCTGTTGCG CGCACGCGGG TGCGAGACAG CAGCCCGCCT
GCGCTTTATA CGCTCAGCCG TGGGGCCAGA GTGCGCGTCT TTGTGGCAAT GCCTGTACAT
GTGAACGAGG CTTTGATCGG GGCGGTCTAT GTCAGCCGTA CACCCAGCCA TATTTTTCGT
TTCCTCTATG GGGAGCGCTT CAATTTGCTA AAGGCCGCTG CCTTTGTTGC ACTGTCTACC
ACGCTGATCG GATATGTGTT CTGGCGCTTC ATCACCCGCC CCATCCGACT GCTGAAAGAG
CGTAGCCAAC TGGCCACCCA AGGCAATCAC GCCTTTGAGG CACCAGATCA TCTTGGCACG
CGCGAGATCG AAGACCTAAG CCTCAGCTTC AAATCGCTGA CCGAGCGGCT GCAGAACAAT
CGCGATGCGC TCAAGACGTA TACGGCCCAT GTCACCCACG AATTGAAATC ACCCCTCACT
GCACTGAAGG GCGCAGCAGA GCTCTTGCGT GACGATGATC TGAGCCAGAG CCAGCGACAT
CGGTTGCTCG ACACGATCGA GAAAGGCGGC ACACGCATAG AAGATCTGCT GGCCCATATG
CGTGCCTTCA GCCTTGCGGA CCAACAAGCG ATGTCCGGGC GCTGTAGTCT TGAGCAGATC
CAAGATCAGA TCACGCAGGC GTTTCCCGCT CTTAGTATCA TGATCGAGAA TGGCTCTCTT
GGTCTACCAT CAGAGGCCAC CACACTCTCC ATCCTGTTGA CGCATCTTTT GCAAAACGCA
CAGCAACATG GCGCAAAAAC CGTCAAACTA CGCACAGCGC ACACAAACGG ATCAATCACC
CTGCGGATCT CGGATGACGG CGCGGGGATC AGTGCGGGCA ATGCCGACAA GATCTTGCAG
CCTTTCTTCA CCACCCGACG CGACAGTGGC GGAACAGGGA TGGGACTCAA TATCGTGAAA
TCGACAGTGG AGGCCCTTGG CGGGCACTTG TACATTCTAC CGCAAGACAC GGGCGCAGGG
TTCGAGTTGG AGTGGCCCAA CGCCACCCCG TCACTGGATC GAACTCAAGC TCCCGGCGCA
TAG
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| Protein sequence | MIRKWRPRLW TVVLLVLAIV LCLPIAGLIL FRFYDNQLVQ QTEESVLAQA AVMAATYADL
YSEAAGLAPP KPKPVSAQDA IFPSLSINSA TVLPPRPDAA NPSTSVTATY QRLAPQLSRI
ASSAQAQTLA GYRFLDTQGN VIAGTAEIGR DLGHVSEVRA ALDGHVVSVA RTRVRDSSPP
ALYTLSRGAR VRVFVAMPVH VNEALIGAVY VSRTPSHIFR FLYGERFNLL KAAAFVALST
TLIGYVFWRF ITRPIRLLKE RSQLATQGNH AFEAPDHLGT REIEDLSLSF KSLTERLQNN
RDALKTYTAH VTHELKSPLT ALKGAAELLR DDDLSQSQRH RLLDTIEKGG TRIEDLLAHM
RAFSLADQQA MSGRCSLEQI QDQITQAFPA LSIMIENGSL GLPSEATTLS ILLTHLLQNA
QQHGAKTVKL RTAHTNGSIT LRISDDGAGI SAGNADKILQ PFFTTRRDSG GTGMGLNIVK
STVEALGGHL YILPQDTGAG FELEWPNATP SLDRTQAPGA
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