| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3315 |
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| Symbol | |
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| ID | 4075720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 323837 |
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| End bp | 324865 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004823 |
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| Product | ABC transporter related |
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| Protein accession | YP_611549 |
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| Protein GI | 99078291 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0775191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.487247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTA CTCTCTGCCG CGTTGCCAAA ACCTATGACG ATGGCACCCG CGCCCTCAAT
CCTACTGATC TGGAAATTGA TCCCGGCGAG ATCATATCGC TCCTTGGCCC TTCGGGTTGC
GGCAAGACCA CCCTCCTGCG CCTCATTGCC GGGCTTGAAG TGCCGGATAC AGGCGCAGAA
ATTCGGTTCG GGGATAAGGA TGTCACCCAC CTGCCCGTTG AAAAGCGCAA TATCGGCATG
GTGTTTCAAT CCTATGCGCT GTTTCCCAAC ATGTCCGTGC GCGACAACAT CGGGTATGGT
CTCAAGATGC AGCGCCTGCC GCGGGCCGAG ATCCAGCGCC GTGTCGACGA AGTCATCACT
CTGTGCCGCC TGGAACCTTA TGCCCACCGC GCGATCACCG CGCTCTCTGG CGGGCAACGC
CAACGGGTCG CACTGGCCCG CGCATTTGCC CCACGCCCGC GCCTGATGCT GCTGGATGAG
CCCCTGTCGG CGCTGGATGC CGCCCTCCGG CTGGAGCTGC GCGACGAGTT GGCCGCGCTC
TTGCGCCAGT TCGGAACCAC GGTGATTTTT GTCACCCACG ATCAGGACGA AGCCCTCGCC
ATCGCGGACC GGGTCGCAGT GATGGAGGGG GGGCATATCC GCCAGATCGG CACTCCAGAA
GAGCTCTATC GCAATCCCAA ATCCGCTTTC GTGGCGGAAT TTGTCGGCCA CGCGATGCCA
TTGCGCGGAG AAATTTCCGA CCGGACGCTC CGTCTCCCCG GCGGTGCCCT GCCGCTGCCG
CTGCCGGACA ATGCCGCAAA CGGTGCCGTC TATGTGCGTG CAGAAGATCT GCGCGTCGAC
CCCAAAGGCC CGCTCAGGGC ACAGGTGGAA ACTGTCACCT TCCTCGGCAC CCATTACCGG
CTTGGGCTCA CCGGGCTGAC GGATCAGCGC CTGTTTGCCC TGCACCACGG AACCTCTGCG
CCCGTTGTCG GCGACACCCT ACACCTGTCC ATTCCGCCTG AGGCCCTGAT TTGCCTCCCC
CAACACTAG
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| Protein sequence | MTLTLCRVAK TYDDGTRALN PTDLEIDPGE IISLLGPSGC GKTTLLRLIA GLEVPDTGAE
IRFGDKDVTH LPVEKRNIGM VFQSYALFPN MSVRDNIGYG LKMQRLPRAE IQRRVDEVIT
LCRLEPYAHR AITALSGGQR QRVALARAFA PRPRLMLLDE PLSALDAALR LELRDELAAL
LRQFGTTVIF VTHDQDEALA IADRVAVMEG GHIRQIGTPE ELYRNPKSAF VAEFVGHAMP
LRGEISDRTL RLPGGALPLP LPDNAANGAV YVRAEDLRVD PKGPLRAQVE TVTFLGTHYR
LGLTGLTDQR LFALHHGTSA PVVGDTLHLS IPPEALICLP QH
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