| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3283 |
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| Symbol | |
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| ID | 4075687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 284032 |
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| End bp | 284922 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004792 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_611519 |
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| Protein GI | 99078261 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.995558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGG ATCAGCTCAT TGCCCTCGAC GCGATTGTGG CTTCCGGAAC TTTCCGGGCG
GCGGCGGATC GGCTGAACAA GGCGCAATCC GCCGTGAGCC ATCAAATCAA GAAACTTGAG
GATGAACTGG GGTTCGACCT CTTCTCGCGG GACACTTATC GGCCCAGATT GTCCCCGGAG
GGCGAGGTCT TTTATCGCGA GGTGACGCGG GTTCTGGAAC AGGTCAACGG TCTGAAGACC
GTGGCGGCGG GGCTGCGCAG CGAGCAGGAG CCTCTGGTCT CGATTGTGAT CACTGCAACG
ATGTCGCTTG ATCCGATCCT GACCCTTTTG GGGGAGGTGG GGCGCGCCTT TCCTGCCACA
CATATCAAGC TGGTAACCGA GATGATGGGT GGCCCGCTGG CGCGTCTCAT GAGTGGTGAG
GCCGATCTGA TTATTGCCGG GCTGGACGAC GTGCCAATCG ATGAGGTCGA AACGCGACCG
GTTGGAACCA TCACCATCCG TCCCGTGGCC AGTCCGGCGT TTCCCGCAGC AGACCCTGCG
CGCGTCAAAT CGCGCCGCGA GATGCAAAGC TACACGCAGG TTGTCGTCTC GGGGACGGGG
GGCAAGGAGT ATGACCAAAG CCGCGATCTG CTTTCGGGGG GGCAGCGCTG GACGGTTTCG
GATTTCCAAG CCAAGATCTC GATCATCAAG GCGGGCCTTG GATGGGGCGG AATACCAGAG
CATCTGATCC GCGATGAACT CAAGACGGGC GCGTTGGTGC CCCTCGCGAT CGAGGGCTAT
CCCCCGCGCC ACACGGAGAT CTTCGCCATC AGGCGCCGGG ACCGCCCCAT GGGTAAAGTC
ATGTCGCGGA TCTGGGACGA TCTTGGACGC GGGGGTATCC AAGACGGCTA A
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| Protein sequence | MTLDQLIALD AIVASGTFRA AADRLNKAQS AVSHQIKKLE DELGFDLFSR DTYRPRLSPE
GEVFYREVTR VLEQVNGLKT VAAGLRSEQE PLVSIVITAT MSLDPILTLL GEVGRAFPAT
HIKLVTEMMG GPLARLMSGE ADLIIAGLDD VPIDEVETRP VGTITIRPVA SPAFPAADPA
RVKSRREMQS YTQVVVSGTG GKEYDQSRDL LSGGQRWTVS DFQAKISIIK AGLGWGGIPE
HLIRDELKTG ALVPLAIEGY PPRHTEIFAI RRRDRPMGKV MSRIWDDLGR GGIQDG
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