| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3271 |
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| Symbol | |
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| ID | 4075413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 272876 |
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| End bp | 274402 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638004780 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_611507 |
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| Protein GI | 99078249 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGG CAGAGTGGTT GAAGCGCACC GCGACCCGGT ATCCCGACCG ACCGGCGCTC
TACGCCGGAG AAACGCTGAG GGCGACCTAT GCGGCCTTTG ACAATTCGGC CGCTGCCATC
GGTGCTGCCC TCGAGGCGCG CGGGGTGGGG CCGGGTGCGC GTGTTGCGAT TTTCATGTCG
AACCGGACCG AATATCTCGA GACGCTCTAT GGTGTCTGGT ATGCGGGCGC GGCGGCGGTT
CCGATCAACG CCAAGCTGCA CCCAAAAGAG GTAATGTGGA TTGTCGCCGA CACCGATGCC
GCTCTGGTGA TTTCGGACGA CGCGCTTGGG GTAGGGCTTG CGCCACTTCT TGAGGGACGG
CAGATGCTCT CTGTGGATAG CGCGGATTTT GCGACGATGC GAAAAGGCGC ACGCATGCCC
GCACCTGTGG GCCTCGTGCC GTCGGATGTA GCCTGGCTGT TTTACACCTC GGGCACGACC
GGCAAACCAA AGGGCGTCGC CCTCACCTGT GGCAACCTCG CGACGATGAC CTTCACCTAT
TTCGCCGATG TGGATGACGT GCGCGCAGAA GATGCCATTC TTTATGCCGC GCCCATGTCG
CATGGGGCCG GGATCTACAA TTTCATGCAT ATCCTGCGCG GCGCGCGTCA TCTCGTGCCC
GAGAGCGGCG GGTTTGACCC GGCAGAGATC CTGACCTTGG GCAAGAGCAT GGGGCCGATC
TCGATGTTTG CGGCGCCAAC GATGGTGCGT CGCCTCGTTG ATGTGGCCAA AGCCAAAGGA
GAGACAGGCG CGGGGCTTAG AACTATCGTC TATGCCGGTG GCCCAATGTA TGAGGCAGAC
ATTCTCGACG CGGTCGATGT CATGGGCGCG CGCTTCATAC AGATCTACGG CCAGGGCGAA
TGCCCGATGG GGATCACCGT TTTGCCTCGC AGCACCGTGG CCGACCGAGC CCACCCGCGC
TGGCGTGAAC GCCTGAATTC CGTTGGCACC GCCCAAAGCG CGGTGCAGGT GCGGATCGTG
GATCAGGACG GTGCCGAACT TCCACGCGGA GAGATTGGCG AAATCGTGGT GCAGGGGGCA
ACGGTGATGC CCGGCTACTG GCAGAAGCCA GAGGCCACCG CAAAGGCCAT TCGCGAGGGC
TGGCTCTGGA CCGGGGACAT GGGGCGGATG GACGCGGACG GCTATGTCAC ACTACAGGAT
CGCTCCAAGG ACATGATCAT TTCCGGTGGA TCCAATATCT ACCCGCGCGA GGTCGAAGAG
GTGCTACTGA GCCATCCCGA TGTGCATGAG GTTGCCGTTG TCGGCGCTGC CGACCCCGAA
TGGGGCGAGG TGGTGGTCGC TTTTGTGGTC GCGTGCGCGG GCAGGGCGGT GACGTCGGGG
GCGCTGGATG CGCTTTGCCT GGATCGTATC GCCCGTTTCA AACGCCCTAA AGCCTATCGC
TTTGTCGAGG GCCTGCCCAA GAACAACTAC GGCAAGGTTC TCAAGACCGA GCTGCGCGAA
GAACTGAAAA AGGACATCGC AACATGA
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| Protein sequence | MNPAEWLKRT ATRYPDRPAL YAGETLRATY AAFDNSAAAI GAALEARGVG PGARVAIFMS
NRTEYLETLY GVWYAGAAAV PINAKLHPKE VMWIVADTDA ALVISDDALG VGLAPLLEGR
QMLSVDSADF ATMRKGARMP APVGLVPSDV AWLFYTSGTT GKPKGVALTC GNLATMTFTY
FADVDDVRAE DAILYAAPMS HGAGIYNFMH ILRGARHLVP ESGGFDPAEI LTLGKSMGPI
SMFAAPTMVR RLVDVAKAKG ETGAGLRTIV YAGGPMYEAD ILDAVDVMGA RFIQIYGQGE
CPMGITVLPR STVADRAHPR WRERLNSVGT AQSAVQVRIV DQDGAELPRG EIGEIVVQGA
TVMPGYWQKP EATAKAIREG WLWTGDMGRM DADGYVTLQD RSKDMIISGG SNIYPREVEE
VLLSHPDVHE VAVVGAADPE WGEVVVAFVV ACAGRAVTSG ALDALCLDRI ARFKRPKAYR
FVEGLPKNNY GKVLKTELRE ELKKDIAT
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