| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3255 |
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| Symbol | |
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| ID | 4075397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 256334 |
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| End bp | 257305 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638004764 |
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| Product | Urea carboxylase |
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| Protein accession | YP_611491 |
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| Protein GI | 99078233 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.166744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.612176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTG AGATTGTGAA GCCGGGACTT GCAACCACTG TGCAGGATCT GGGGCGCCCG
GGCTATTTCC ATCTTGGAAT CCCCGAGGGC GGTGCGATGG ATCGCCTTGC GCTGCGGGCG
GCGAACATGC TGGTCGGAAA CGAGGATGGC GCGGCCTGTC TCGAGGCGGT CTTTATGGGC
CCCGAGGTGA AGTTTGGCGC GGATATGACC GTCGCTGTGA CCGGGGCTGA GCTGCCGGTG
CTGCTGGACG GCATGCCACG CAACACGTGG TCGAGCATTT CGGTCAAAGC CGGGCAGGTG
CTCTCGTTTG GGTTCCTCAA AGAGGGGGCG CGGATCTATA TCGCCGTCTC AGGCGGGATC
GACACGCCGC CTGCGTTGGG GTCTCGTTCC ACCTACGCGA TCGGCGCGCT TGGCGGCTTT
GAGGGCCGTC CCGTTGCGGC CGGAGATGTG ATCCCGCTGG GGCGGGGCGC GGGGATGCCG
GAGGGGCGCA TAGTGCCAGA CGCGCTGCGC CGCCGCCCTG CAAAACCCGC CGCCTTGCGC
GTGCTTCCCG GCCTCTACTG GCACCGTTTG ACCGAAAAAA GCCAGGCAGC GTTTTTTGAG
GATGACTGGA CCGTCGCCCC GGAAGCAGAT CGCATGGGCT ACCGGTTCAG AGGCGGGCAG
GCGATGGAAT TTGTTGATCG TGATCAACCG TTTGGAGCCG GATCAGACCC GTCCAACATC
GTCGATGGCT GCTATTCCTA TGGCTCCATC CAGGTGCCCG GAGGGCTCGA GCCCATCGTT
TTGCACCGCG ACGCGGTCTC GGGCGGGGGG TATTTCACCC TCGGGGCCGT GATCTCGGCG
GATATGGACC TGATCGGCCA ACTGCAGCCC AATACGCCGG TCAAATTCAT GCGCGTTGAT
ATGGATCAGG CGCTTGCCGC TCGAAAGGCC CGCAAAGAGA CCATCGAGCA GATCCGTCAG
GCGCTCTCCT AG
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| Protein sequence | MTLEIVKPGL ATTVQDLGRP GYFHLGIPEG GAMDRLALRA ANMLVGNEDG AACLEAVFMG
PEVKFGADMT VAVTGAELPV LLDGMPRNTW SSISVKAGQV LSFGFLKEGA RIYIAVSGGI
DTPPALGSRS TYAIGALGGF EGRPVAAGDV IPLGRGAGMP EGRIVPDALR RRPAKPAALR
VLPGLYWHRL TEKSQAAFFE DDWTVAPEAD RMGYRFRGGQ AMEFVDRDQP FGAGSDPSNI
VDGCYSYGSI QVPGGLEPIV LHRDAVSGGG YFTLGAVISA DMDLIGQLQP NTPVKFMRVD
MDQALAARKA RKETIEQIRQ ALS
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