Gene TM1040_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3237 
Symbol 
ID4075379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp237883 
End bp238554 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID638004746 
ProductDSBA oxidoreductase 
Protein accessionYP_611473 
Protein GI99078215 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC CCGTGCTTAC CATCGACTTC TTTCACGACG CGGTTTGCGG CTGGTGTTTT 
GTGATGTCCC CAAAACTACG CAAGCTGGCG GCTGAATTTC CGATCCGTAT ACGCCACCGT
AGCTTTGTTC TGCAGGACTC GCCTGCCAAA CTCGCCGCAG CCTTCGGCTC AGCCGAGAAA
GCCAAGTCCG CTATCCTTGG ACACTGGGAG CGCTGCGCCG AACATGACGA AGGCGGTCGC
ATCAATGTGG AAGGGATGCG CCGTCAGCGC TTTCCCTATC CTTCCGGGTT ATTGAGCGCC
AAAGCGTGCA AGGCCGCTGA ATTGCAGGCT GGTGACGCCG GGCACTGGGA CTACTTCGAT
GCCGTGCAAG CTGCGCATCT GACAGATAAC CGCAACATCG CTGACGAGCG CGTTCTGTTG
GACGTCGCCC TAGTCTGCGC GCTGGATTCC AACCGTCTGC GTAAAGACAT GCACAGTCCG
GAAGTGGCGC GATTGGTCTC TCAGGACCGC CAATTGGCGT CTTCGTGGTG GGTCAGCGCC
GTGCCGACGC TTGTGGTAGA TGGCGGACAG TCGCAGCTGC GCCACGGCTC GCTCGAACAA
ATGCGCGCAG AACTGGCATT GCTTTTGGCG GACCGGGTGG CGCGTGTCCC CGCTGGCAAT
CGTCAGCAGT AA
 
Protein sequence
MTSPVLTIDF FHDAVCGWCF VMSPKLRKLA AEFPIRIRHR SFVLQDSPAK LAAAFGSAEK 
AKSAILGHWE RCAEHDEGGR INVEGMRRQR FPYPSGLLSA KACKAAELQA GDAGHWDYFD
AVQAAHLTDN RNIADERVLL DVALVCALDS NRLRKDMHSP EVARLVSQDR QLASSWWVSA
VPTLVVDGGQ SQLRHGSLEQ MRAELALLLA DRVARVPAGN RQQ