Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3234 |
Symbol | |
ID | 4075376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | + |
Start bp | 235287 |
End bp | 236060 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638004743 |
Product | phosphonate ABC transporter ATP-binding |
Protein accession | YP_611470 |
Protein GI | 99078212 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3638] ABC-type phosphate/phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02315] phosphonate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGA TCACAAACCT GACCAAGCGC TACGGCAGCG GCGACCCCGT CCTGAAAGAG CTGAACCTGA CCGTTGAGGG CGAACAGCTG ACCTCCGTGA TCGGCTCTTC GGGCGCTGGC AAATCCACGC TTTTGCGCTG CATCAACCGT CTCGTAGAGC CGACCTCCGG TTCAGTCGAA TTGAACGGCA CCGAATTCAC TACCTTGTCC CGCCGCGAGC TGCGCAGCGC GCGCCGCCGC ATCGGCATGG TGTTTCAGGG CTTCAACCTG ATCGACCGGC TCACGGTGAT GGAGAACGTA CAGGCCGGGC GGCTTGGGTA CATTTCCACC TGGGCTGCGC TGACCCGCCG CTACCCCAAG GACGACATTC GCCGGGCCTT CGAACTCATG GAGCGTGTGG GCATCGCCCA TTACGCGGAC AAACGTGCCG ATGAGCTCTC GGGCGGGGAA CGTCAGCGGG TGGGGGTTGT GCGCGCCCTG ATGCAACGGC CGGAGATCCT GCTCGCGGAC GAGCCCACAG CGTCGCTCGA TCCCAAGACC TCTGAGCAGA TCATGTCCCT GCTGCGCGAT CTGGCGCAGG AGCTGAACCT GCCTGTGATC ATCAACATTC ACAACGTGAC CGAAGCCAAG GAATACTCCG ACCGGATCGT CGGGATGCGC TATGGACGGA TCATCTTTGA CGACAAACCC GCCGCGCTGA CCCGTGACGA GATGGATACG ATCTATGCCG GCGTGCCCGC GCAGGACCGC GCCGAAGTGG GAGCCGTTGC ATGA
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Protein sequence | MLKITNLTKR YGSGDPVLKE LNLTVEGEQL TSVIGSSGAG KSTLLRCINR LVEPTSGSVE LNGTEFTTLS RRELRSARRR IGMVFQGFNL IDRLTVMENV QAGRLGYIST WAALTRRYPK DDIRRAFELM ERVGIAHYAD KRADELSGGE RQRVGVVRAL MQRPEILLAD EPTASLDPKT SEQIMSLLRD LAQELNLPVI INIHNVTEAK EYSDRIVGMR YGRIIFDDKP AALTRDEMDT IYAGVPAQDR AEVGAVA
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