Gene TM1040_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3229 
Symbol 
ID4075371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp227859 
End bp228323 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content57% 
IMG OID638004738 
Product(2Fe-2S)-binding 
Protein accessionYP_611465 
Protein GI99078207 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTT CACTAAAGTT GAACGGGGAG ACCCACACGG TTGAGGCCGA GCCAGGTACA 
CCGCTTTTGT GGGTGATCCG GGATGAGCTG AAGCTCACCG GCACCAAATT CGGATGTGGG
GTTGCGTCGT GCGGCGCCTG CACCGTTCAT ATGGATGGCG CACCGATCCG GTCTTGCCAG
ACCTATATCG AGGATGTGGA AGGTGCAGAG ATCACCACGA TCGAGAAAAT GGAAGACGAC
AAGGTTGGTG CCGCGGTCCA GCAAGCCTGG CGCGAGCTCG ACGTGGTTCA ATGCGGCTAT
TGTCAGTCTG GTCAGATCAT GAGCGCGGTG GGCCTGTTAC GCGAAAACGC AAAGCCCACG
GCAGAGGATG TTGACAACTA CATGTACGGG AACGCCTGCC GCTGTGCGAC TTATCAACGT
ATCCGCGCAG GTGTCTTGCG CGCTGCGGAA ATTCTGGAGG CTTGA
 
Protein sequence
MAISLKLNGE THTVEAEPGT PLLWVIRDEL KLTGTKFGCG VASCGACTVH MDGAPIRSCQ 
TYIEDVEGAE ITTIEKMEDD KVGAAVQQAW RELDVVQCGY CQSGQIMSAV GLLRENAKPT
AEDVDNYMYG NACRCATYQR IRAGVLRAAE ILEA