| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3199 |
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| Symbol | |
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| ID | 4075303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 194300 |
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| End bp | 195226 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004708 |
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| Product | proline racemase |
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| Protein accession | YP_611435 |
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| Protein GI | 99078177 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3938] Proline racemase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.317933 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.850196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGTAA TCGACAGCCA TACCGGCGGG ATGCCCACAC GGGTCATCCT TGACGGCAGC
CCCGATCTTG GATCGGGGCC GCTTTGTGTG CGGGCAGAAA CACTGTCGCG CGCGCATTCA
GAGTTTTGCG ACTCGGTCCT GCTCGAGCCG CGTGGCCAAC CGGGCATGGT TGCCGCCCTA
TTGGTTGAAC CCGTGGACCC CGAGTGTGTC ACCGGGGTGA TATATTTCGA TGCCGACGCC
GTGTTGGGCA TGTGTGGGCA TGGCACCATT GGGCTTGCCG TGACGCTTGC GCATTTGGGC
CGGATCGACG TTGGCACACA TAAGATCGAA ACGCCTGCAG GGATCGTGAC GGTCGAACTG
CACGATGCAA ACACCGTCTC TGTAACCAAC ATTGAGAGCC GCCGCATTCA CCACGCGGTC
TCTGTCGAGG TCAAAGGACA CGGCAGTTTT ACCGGCGACT TGGCCTATGG CGGCAATTGG
TTCTTTATCT GCGATGCACC GATCGAAGTG TCGACCGGCA ATATTGCAAC GCTCACCGAA
CTGTCGATCG CGATCAGAGA GGCCTGCGTG CAAAACGGCG TCTGCGGCCC GGATGGCGAA
GCCGTGGATC ATGTGATCCT GCGTGGCGCC AGCCCGAATG CCAGCAGCTT CAGCCGCAAC
TTTGTGCTCT GCCCCGACAA CGAATATGAC CGATCGCCAT GTGGGACCGG CAGCTCCGGC
TTTGTGGCCT GCCTTGCCGC GTCAGGCCAA TTGGCGGAAG GCACGGAGAT TGTGCTCGAA
AGCGTCATCG GAAGCGCCTA CACGCTCTCC TACAGGAATG GCCCGACGGG CGGGGTGATC
CCGCGCATCA CTGGCCAGGC CTATGTCATG GCGGAGGCAA CATTGCTGTT TGCAACACAA
GACCCCTTCA AAGCCGGGAT CACCTGA
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| Protein sequence | MHVIDSHTGG MPTRVILDGS PDLGSGPLCV RAETLSRAHS EFCDSVLLEP RGQPGMVAAL
LVEPVDPECV TGVIYFDADA VLGMCGHGTI GLAVTLAHLG RIDVGTHKIE TPAGIVTVEL
HDANTVSVTN IESRRIHHAV SVEVKGHGSF TGDLAYGGNW FFICDAPIEV STGNIATLTE
LSIAIREACV QNGVCGPDGE AVDHVILRGA SPNASSFSRN FVLCPDNEYD RSPCGTGSSG
FVACLAASGQ LAEGTEIVLE SVIGSAYTLS YRNGPTGGVI PRITGQAYVM AEATLLFATQ
DPFKAGIT
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