| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3192 |
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| Symbol | |
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| ID | 4075296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 185663 |
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| End bp | 186469 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638004701 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_611428 |
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| Protein GI | 99078170 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAC CCGCGTTCTC GATGCGCATT CGCAGCCTCG AGGATAAGCT GGGACTCTCG
ATTGTGCGCC GTGGCAATCG GTTTCAGGGA CTCACGGCGG AAGGCCAGAT GATCGTGGAG
CGCGCGCGTG GGATTCTCGA CGACGCAAAG GCGCTTGATC AGGAAATTGC TGCCGCCCGT
GGCGAAGTGA CCGGGACTTT GGTGATCGGG GTTGTGCCAA CGGCGACCTC TTACGCGGCG
CAGCTTGTGG ATCGGATGCA TCAGGCGCAT CCTCGGGTCT TCGTGCGCCT CGAAGTCACC
ACCTCGCTCA GCATTCAGCA GCGGCTCTAT GATGGGACGC TGGATGTGGG GGTGACCTAC
AGCGACAGCG TCGGTCGCGA CGACATGAGC GTCACGGATC TCTACGACGA GGCCTATGTT
GTCTTTGCCT CCGAACAGAT GCTGTCGGGA CACGAGACGC AGATGTCGTG GCGCAATGCG
GCACAGCTGC CGTTGAGTTT GCTGGAGCCG CAAATGCAGA ACCGGCGTAT TCTGGACCGG
ATTTTTGCCG ATCTCGATCT GCGACCAGAG ATCGTTTCGG AGTCCAGTGG CTTTATGGCG
TCACTGGTGA TGGCGCGGGC CGGGTCGGTG GCCACCATCC TTCCTCAGGC CCTGGTCGAA
GCCTTGGGGC CACTTCAAGG GACACGCACA TTGCGGTTGG TCGATCCCGA GCCCTCGTGG
CCGATTTGCC TGGCCTCTGT CGAGCGTCAG CCTGAACTGA CGACCATCCG GGCACTCAAG
GCTGTGATCG CAGCGGGGCC ACTCTAG
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| Protein sequence | MSQPAFSMRI RSLEDKLGLS IVRRGNRFQG LTAEGQMIVE RARGILDDAK ALDQEIAAAR
GEVTGTLVIG VVPTATSYAA QLVDRMHQAH PRVFVRLEVT TSLSIQQRLY DGTLDVGVTY
SDSVGRDDMS VTDLYDEAYV VFASEQMLSG HETQMSWRNA AQLPLSLLEP QMQNRRILDR
IFADLDLRPE IVSESSGFMA SLVMARAGSV ATILPQALVE ALGPLQGTRT LRLVDPEPSW
PICLASVERQ PELTTIRALK AVIAAGPL
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