| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3191 |
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| Symbol | |
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| ID | 4075295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 183861 |
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| End bp | 185549 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638004700 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_611427 |
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| Protein GI | 99078169 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCTC TGGACAATAC ATCTGGCGTT TGGAAATCCG GACGCGGCAA GGGGCGCAAA
ACCCCAAAAG GTCGTCAGCT AGACGATCAG GCGCATACCG AGATCCTGGA TCTTCTGGGC
GCGCGTCCCC GCGATCGCGA TCTGTTGATC GAGTTCCTGC ATCTGGTTCA GGACAAATTC
GGCCATATTT CCGCAGCGCA TATCCGCGCG CTCTCTGAGG AAATGCGGGT CGGTCAGGCG
GAGATCTACG AGGTCGCCAG CTTTTATGCG CATTTCGATG TGGTCAAAGA AGGCGAGACA
CCGCCGCCTG CTCTGACGAT CCGGGTCTGT GATTCATTGT CCTGCGAACT TGCGGGCGCC
GAGCAACTGA AAAAGGCGCT GGAAGACGGT ATGAACCCCG CGCAGGTCCG CGTTTTGCGC
GCTCCCTGCA TGGGGCGGTG CGATACCGCG CCGGTGCTCG AGATCGGTCA TAACCACATC
GACCACGCCA CCCTGGCAAA GGTCGAGACA GCGATCGCGA GCGATGACAC CCACGCCCAC
ATCCCCGATT ACGAGACCTA TGAGTCTTAT GCCGCAGAGG GCGGCTATGC GGTTTTGCAA
GATCTGCGCG AGAGCGGCGA TTGGGAAGCG GTCCAAGAAA AAGTTCTGTC GGCAGGGCTG
CGGGGTCTTG GGGGTGCAGG CTTCCCGTCC GGCAAGAAAT GGGGTTTTGT GCGTGCCAAT
GAGGGGCCGC GCTATCTCGC CGTGAATGGC GATGAAGGCG AGCCGGGGAC TTTCAAGGAT
CGCTACTATC TTGAGCGCAC GCCACATCTC TTCCTTGAGG GGATGTTAAT TGCGGCTTGG
GCGGTGGAGG CGGAGAGGTC CTTCATCTAT ATGCGGGACG AATACCCGGC CGTTCTGGAG
ATCCTGCGCC GCGAGATTCG CGCGCTCGAG GAAGCGGGCA TCGTGGAGGC AGGCTATATC
GATCTGCGTC GCGGGGCAGG GGCCTATATC TGCGGCGAAG AATCCGCGAT GATCGAATCC
ATCGAGGGCA AACGCGGCGA GCCGCGCCAC CGCCCGCCCT TTGTGGCGCA AGTGGGGATC
TTTGGGCGGC CGACCCTCGT GCACAATGTC GAGACGTTGT ATTGGATCGC GAAAATCAAT
CGCGAAGGGC CAGAGTGTCT GAACGCGGTT GAGAAGAACG GGCGCAAGGG GCTGAGGTCC
TATTCCGTCT CCGGTCGCGT CCAGAACCCG GGCGTGCATC TGCTGCCTGC TGGCTCCACC
ATCCTTGATG TGATCGAAGC CGCGGGTGGC ATGCTCGAGG GCCACTTGTT CAAGGCCTAC
CAGCCGGGCG GGCCGTCTTC GGGTTTGTTG CCTGCACATA TGAATGATAT TCCGCTCGAT
TTTGACACGC TACAACCACA TGGATCATTC ATCGGCTCTG CCGCTGTGGT GGTGTTGTCC
GATCAGGATT CCGCGCGGGA TGCGGCGCTC AATATGCTTC GGTTCTTTGA GGATGAAAGC
TGTGGCCAAT GCACCCCCTG CCGGGTGGGC TGTGAAAAGG CCGTGAAACT GATGCAGGCC
GAAAAATGGG ATCAGTCGCT TCTTGAGGAA CTCAGTCAGA CCATGGTGGA TGCCTCCATC
TGCGGTCTGG GCCAAGCCGC GCCCAACCCG ATCCGCCTCA CAATGAAACA CTTCCCCGAG
GAGATCTGA
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| Protein sequence | MAPLDNTSGV WKSGRGKGRK TPKGRQLDDQ AHTEILDLLG ARPRDRDLLI EFLHLVQDKF
GHISAAHIRA LSEEMRVGQA EIYEVASFYA HFDVVKEGET PPPALTIRVC DSLSCELAGA
EQLKKALEDG MNPAQVRVLR APCMGRCDTA PVLEIGHNHI DHATLAKVET AIASDDTHAH
IPDYETYESY AAEGGYAVLQ DLRESGDWEA VQEKVLSAGL RGLGGAGFPS GKKWGFVRAN
EGPRYLAVNG DEGEPGTFKD RYYLERTPHL FLEGMLIAAW AVEAERSFIY MRDEYPAVLE
ILRREIRALE EAGIVEAGYI DLRRGAGAYI CGEESAMIES IEGKRGEPRH RPPFVAQVGI
FGRPTLVHNV ETLYWIAKIN REGPECLNAV EKNGRKGLRS YSVSGRVQNP GVHLLPAGST
ILDVIEAAGG MLEGHLFKAY QPGGPSSGLL PAHMNDIPLD FDTLQPHGSF IGSAAVVVLS
DQDSARDAAL NMLRFFEDES CGQCTPCRVG CEKAVKLMQA EKWDQSLLEE LSQTMVDASI
CGLGQAAPNP IRLTMKHFPE EI
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