Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3172 |
Symbol | |
ID | 4075342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 152144 |
End bp | 153709 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638004675 |
Product | ASPIC/UnbV |
Protein accession | YP_611408 |
Protein GI | 99078150 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.72438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCGGC CTGAGACGTG CGTTTGGCCT GTGGCGGCCC TGTTTGCTTC GGTGGCGCAG GCCGACCCGC AGATCCCCAG GTTTACTCCG ATCGAGATGG GTGAACATAT CTACAGCGGC GGCTGGGAAC ACTACGTGGG CGGCGGTCTG GCGGTGTTCG ACTGCAACGG CGACGCTCTG CCGGAGCTCT ATGCCGCTGG TGGCGAGACC CCGGCCCAGT TGTTCCTCAA CACCTCCGGC GCGGACGGCG CGCTTTCTTT TCAGCCGGCC ACGCCCGAGG CGCTGGCCCT GACGGGCGTG ACGGGGGCCT ATCCCATCGA CATTGATGGC GACGGCCATC TTGATCTGGC GGTGATGCGG GCCGGGACGG ATCTCTTGCT GCAAGGGCAG GGGGGCTGCG CCTTTCACCC CTTTCAGGGA CTGGGCTTTC AGAGCGGCGA TCACTGGACC ACGGGTTTTT CCGCCACTTG GGAGGGCGAG AACACCCTGC CGACGCTGGC CTTTGGCACC TATGTGGACC GCGCCAACCC CGAAGGGCCG TTTGGCACCT GCGATGATAC ACTGCTCTAT CGCCCCAGCG GCGACAAATA CGGCCCCCCC GAGGCGCTGT CGCCGGGCTA TTGCGCGCTC TCGGTGCTGT TCAGCGACTG GAACCGCACA GGCCGCGCCG ATCTGCGGCT GTCGAACGAC CGGCACTATT ATGTGCGCGG CGGGCAGGAA CAGATGTGGG CGATGGAGGC CACCCCGCGG CTCTATACTG AGGCCGAAGG CTGGAAGCCC TATGCGCTCT GGGGCATGGG CATCGCCTCG CGCGACATGA ATGGCGACGG GTTTGCGGAT GTCTATCTGA CGTCCATGGG CGATCAGAAG TTTCAACTGC GCAACCCCGA GGCCGAGGGG CCGGTCTGGG AGGATGTCAC CTATGGGTTT GGCACTACCG CACATCGACC CTATACGGGC GGCGATGGGC GCCCCTCGAC CGGCTGGCAC GCAGCCTTTG GCGACGTGAA CAACGACGGG CTGGACGATA TTTTTGTGAC CAAGGGCAAC GTGGAACAGA TGCCCGATGC CGCCCAGAAA GACCCCAATA ACCTGATGTT GCAGCAACAG GACGGCCTGT TCACCGAAGC CGGCGCAGAG GCGGGGATCG CAAGCCTTCA GCGCGGGCGC GGGGGCGCTC TGGTTGATCT CAACCGCGAT GGCCTGCTCG ATATGGCGGT GGTCAATCGC CGCGCCCCGC TCGAGGTCTG GCAAAACAGA GGCCCCGCGG ATGCGACGGG CGGCAACTGG CTGCTGCTGC GCCTTGGCGC AGAGGGGCCC AACCGGGACG CCATCGGCGC CTTTGTCGAA GTCACGGCTG GCGATCGCAC CTACCTGCGC GAAGTGACGA TCGGCGGCGG ACATGCAGGC GGCGATCTGG GCGATCTGCA TTTTGGTCTT GGCGGGGTGG AAACGGTCGA TCTGCGCGTG ACCTGGCCCG ATGGGCAGGT GTCGGATTGG TCGACCGTGA AGGCCAATCA GCGGCTTTTG CTCCGTCCCG GACGCTTGCC GACGCCCGAG GACTAA
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Protein sequence | MRRPETCVWP VAALFASVAQ ADPQIPRFTP IEMGEHIYSG GWEHYVGGGL AVFDCNGDAL PELYAAGGET PAQLFLNTSG ADGALSFQPA TPEALALTGV TGAYPIDIDG DGHLDLAVMR AGTDLLLQGQ GGCAFHPFQG LGFQSGDHWT TGFSATWEGE NTLPTLAFGT YVDRANPEGP FGTCDDTLLY RPSGDKYGPP EALSPGYCAL SVLFSDWNRT GRADLRLSND RHYYVRGGQE QMWAMEATPR LYTEAEGWKP YALWGMGIAS RDMNGDGFAD VYLTSMGDQK FQLRNPEAEG PVWEDVTYGF GTTAHRPYTG GDGRPSTGWH AAFGDVNNDG LDDIFVTKGN VEQMPDAAQK DPNNLMLQQQ DGLFTEAGAE AGIASLQRGR GGALVDLNRD GLLDMAVVNR RAPLEVWQNR GPADATGGNW LLLRLGAEGP NRDAIGAFVE VTAGDRTYLR EVTIGGGHAG GDLGDLHFGL GGVETVDLRV TWPDGQVSDW STVKANQRLL LRPGRLPTPE D
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