| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3168 |
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| Symbol | |
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| ID | 4075338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 148721 |
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| End bp | 149581 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004671 |
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| Product | aminotransferase, class IV |
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| Protein accession | YP_611404 |
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| Protein GI | 99078146 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR01121] D-amino acid aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTA CCGTATATGT AAACGGCGAC TACCTGCCGG AAACCGAGGC CAAGGTCTCT
ATCTTTGATC GCGGCTTTCT GATGGCGGAT GCGGTCTATG AGGTGACTTC TGTGCTGGGC
GGCAAGCTCA TCGATTTTGA GGGCCACGCG GTGCGCCTGA AGCGGTCGCT GGATGAACTC
GATATGGCCG AGCCCTGCAC CAAGGAGGAA CTCCTTGAGA TCCACCGCAA GCTGGTGGAG
CTGAATGATA TCGACGAGGG TCTGGTCTAT CTGCAGGTCA CGCGCGGCTC GGACGGGGAT
CGGGATTTTG TGTTCCCGTC TGAGGATACA AAACCGACCA TCGTGTTGTT TACACAGAAC
AAACCCGGCC TCGCCGATAG CCCCGCCGCC AAGAAAGGTG CCAAGATCAT CTCGATCGAG
GACATCCGCT GGGGCCGTCG CGACATCAAG ACCGTGCAGC TGTTGTACCC CTCCATGGGC
AAGATGATGG CCAAAAAAGC CGGTGCCGAT GACGCCTGGA TGATCGAGGA TGGCCATGTG
ACCGAGGGCA CCTCCAACAA CGCCTATTTC GTGAAGGATG GCGTGATAGT CACCCGCCCG
CTGTCCAATG ACATCCTCCA CGGGATCACC CGCAAGGCGG TTCTGCGCAT GGCCGAAGAA
GCCCAGCTGA AGGTCGAAGA GCGCCTCTTT ACCATCGACG AAGCCAAAGC GGCGGATGAG
GCGTTTACCA CCTCGGCCTC TGCATTTGTG ATGCCGGTTG TGGAGATCGA TGGCGTGGCC
TTGGGTGACG GCACACCGGG TCCCATCGCC AAACGTCTGC GCGAGATCTA CCTTGAGGAA
AGCATCAAGG CGGCTGTGTG A
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| Protein sequence | MTRTVYVNGD YLPETEAKVS IFDRGFLMAD AVYEVTSVLG GKLIDFEGHA VRLKRSLDEL
DMAEPCTKEE LLEIHRKLVE LNDIDEGLVY LQVTRGSDGD RDFVFPSEDT KPTIVLFTQN
KPGLADSPAA KKGAKIISIE DIRWGRRDIK TVQLLYPSMG KMMAKKAGAD DAWMIEDGHV
TEGTSNNAYF VKDGVIVTRP LSNDILHGIT RKAVLRMAEE AQLKVEERLF TIDEAKAADE
AFTTSASAFV MPVVEIDGVA LGDGTPGPIA KRLREIYLEE SIKAAV
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