| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3102 |
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| Symbol | |
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| ID | 4075549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 71833 |
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| End bp | 72552 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004604 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_611338 |
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| Protein GI | 99078080 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.644499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTACGAC GTCACAGTTT TAACGCCATC CTTGAGTTGA TCGAAAGCTC CGCAAATCTC
GAGGAGATTG GCGAAGTTCT TGCCCAGTTC CGCAATCTTG TTGACCTCGA TCATGTGAGC
TACCGATGGG TCGATCGCAG CGGCAGTGTC AGCGGCTGCT CGACCCTGCC GACAGCCTGG
CAGGACCGTT ATTCTGCCAT GAGCTATCAT CGCATCGATC CGGTTGTAAT CGGTTGCTAT
ACCGCATTTC ATCCGGTCGA TTGGCGCGAT CTGGACTGGT CTGCGCGTCT TGCGTCGGCC
TATCGCAAGG ACTCCATAGC CTTTGGGGTC GGCAATCAGG GCTATAGCGT TCCGGTGCGC
GGGCCAGCCG GGCAATATGC CATCCTGAGC ATCACAAAAT CCTGCGAAGG CGAGGTTTGG
GATAAATTCA CCCAGAAACA CAGCCGCGAC CTGATCCTGT TGGCGCATTA TGTCAATCGC
CGCGCGCTGG AGTTCGAGGT GAGCTATTAC CCAACCCCGG AGCAGCCGCT CTCCATGCGC
GAGTCCGAGG CACTCAGCCT CTTGGCCGAA GGCATGAGCC GCGCGCGCGC CGCCGAGGCG
ATGGCGATTT CCGAACACAC GCTTCGGGTC TATATCGAGG GTGCGCGCAG CAAGTTGCAG
GCTCAGAACA CCACGCATGC GGTGGCGCGC GCGGTGACAA TGGGGCTGAT TGCAACCTGA
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| Protein sequence | MVRRHSFNAI LELIESSANL EEIGEVLAQF RNLVDLDHVS YRWVDRSGSV SGCSTLPTAW
QDRYSAMSYH RIDPVVIGCY TAFHPVDWRD LDWSARLASA YRKDSIAFGV GNQGYSVPVR
GPAGQYAILS ITKSCEGEVW DKFTQKHSRD LILLAHYVNR RALEFEVSYY PTPEQPLSMR
ESEALSLLAE GMSRARAAEA MAISEHTLRV YIEGARSKLQ AQNTTHAVAR AVTMGLIAT
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