Gene TM1040_3067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_3067 
Symbol 
ID4075161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008043 
Strand
Start bp37311 
End bp37790 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content64% 
IMG OID638004568 
ProductNUDIX hydrolase 
Protein accessionYP_611303 
Protein GI99078045 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC CGACGCGCCG CCCGATCCTT GGAGCCCTTG GCGTGGTCTG TGCCAATATT 
GATGGCGCGG ATTGCGTGAT CCTCGTGAAG CGCAAGAACC CGCCCAATGC CGGAACTTGG
GGCTTCCCGG GCGGGCATGT GGAGCTTGGT GAAACCGCAG CCGCAGCCGC CGCTCGCGAG
CTTTTGGAAG AAACCGGTGT TGTCGCAGAG CCGGGGGCGC AGTTGATGAC CCTTGATGTG
ATCCCCCGCG CTGCAGATGG CACGGTGGAG GGCCAGTATT TCCTGGTGGC AACGCTCTGT
CACTACATCT CGGGAGATCC CGTGCCCTAT GATGATGCGC TGGAGGCGCG TTGGGTGCCG
GTGGCGCAGA TCGAAGATCA GGGGCTTGAG CTTCTGGATC GGGTGGCGGA GCTTGCGCGG
CGCGCTCAGG AGGTCTGGCG TGATGTCCCG CGCAGTGCGC CCACCGCCCC AATCACATAA
 
Protein sequence
MTDPTRRPIL GALGVVCANI DGADCVILVK RKNPPNAGTW GFPGGHVELG ETAAAAAARE 
LLEETGVVAE PGAQLMTLDV IPRAADGTVE GQYFLVATLC HYISGDPVPY DDALEARWVP
VAQIEDQGLE LLDRVAELAR RAQEVWRDVP RSAPTAPIT