Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3067 |
Symbol | |
ID | 4075161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008043 |
Strand | - |
Start bp | 37311 |
End bp | 37790 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638004568 |
Product | NUDIX hydrolase |
Protein accession | YP_611303 |
Protein GI | 99078045 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATC CGACGCGCCG CCCGATCCTT GGAGCCCTTG GCGTGGTCTG TGCCAATATT GATGGCGCGG ATTGCGTGAT CCTCGTGAAG CGCAAGAACC CGCCCAATGC CGGAACTTGG GGCTTCCCGG GCGGGCATGT GGAGCTTGGT GAAACCGCAG CCGCAGCCGC CGCTCGCGAG CTTTTGGAAG AAACCGGTGT TGTCGCAGAG CCGGGGGCGC AGTTGATGAC CCTTGATGTG ATCCCCCGCG CTGCAGATGG CACGGTGGAG GGCCAGTATT TCCTGGTGGC AACGCTCTGT CACTACATCT CGGGAGATCC CGTGCCCTAT GATGATGCGC TGGAGGCGCG TTGGGTGCCG GTGGCGCAGA TCGAAGATCA GGGGCTTGAG CTTCTGGATC GGGTGGCGGA GCTTGCGCGG CGCGCTCAGG AGGTCTGGCG TGATGTCCCG CGCAGTGCGC CCACCGCCCC AATCACATAA
|
Protein sequence | MTDPTRRPIL GALGVVCANI DGADCVILVK RKNPPNAGTW GFPGGHVELG ETAAAAAARE LLEETGVVAE PGAQLMTLDV IPRAADGTVE GQYFLVATLC HYISGDPVPY DDALEARWVP VAQIEDQGLE LLDRVAELAR RAQEVWRDVP RSAPTAPIT
|
| |