| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3060 |
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| Symbol | |
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| ID | 4075154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | + |
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| Start bp | 28710 |
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| End bp | 29681 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638004561 |
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| Product | translation factor SUA5 |
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| Protein accession | YP_611296 |
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| Protein GI | 99078038 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.279316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACCCG CCATGACCCA AGCCTCATCT GAGACCGAAG CGCTGACCGC AGCACCCGAA
GCCATCGCCC GCGCGGCCGA GTTGCTCACC GCTGGTCAGC TCGTGGCCTT TCCGACCGAG
ACCGTTTACG GCCTTGGGGC AGATGCCACC AATGGGGCGG CAGTCGCTGC GATCTACGCC
ACCAAAGGGC GTCCCTCTTT CAACCCGCTC ATTGCCCATG TGGCGGATGT CCGCGCCGCA
CGCAGACTTG TGCAGTGGAA CGACTGGGCC GAAGCGATGG CCACGGCCTT CTGGCCCGGC
CCGTTGACGC TGGTGCTGCC GCTGCGACCG GATCACAATG TTTCACCCTT GGTGACGGCT
GGGCTTGATA CGCTCGCGGT TAGGGTGCCG GCCAAGGCTT GCTCACGCGA GTTGCTGGCA
GCTGTAGGAC GCCCGGTGGC CGCCCCCTCT GCCAATCCTT CGGGTCGGAT CAGCCCGACA
ACCGCCGATC ATGTGCGCGC GGGCCTCGGG GGTAAGATCG CCGCAATTTT GGACGATGGC
CCCTGCGGGG TCGGTGTGGA ATCCACCATC CTCGGACTGG CCGGAGCCGC GCCGATCCTC
CTGCGCCCGG GCGGGCTGGC TGCTGAGGAC ATCGAGCACG CCCTCGGCTG CACGCTGATG
ACGCGCGCGG AGGCAGATCC CTTGACCGCA CCGGGGCAGC TCATGTCGCA TTACGCGCCC
AATGCCTCCG TCCGGCTTGA GGCGCAGGAT TTTTCCCCGG ATGAGGTCTC GCTTGGATTT
GGACCAGGAG ACTTCGACCT GAACCTCTCG CCCAGTGGGG ATCTCAACGA GGCGGCGGCA
AACCTCTTTG GGCATCTGCA TCACCTGGAT GCTTTGGGTC GACCAATCGC GGTCGCACCC
GTCCCGGAGC GTGGGCTTGG CATTGCCATC AACGACCGCC TGCGCCGCGC CGCGGCCCCG
CGCGACAGTT GA
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| Protein sequence | MSPAMTQASS ETEALTAAPE AIARAAELLT AGQLVAFPTE TVYGLGADAT NGAAVAAIYA
TKGRPSFNPL IAHVADVRAA RRLVQWNDWA EAMATAFWPG PLTLVLPLRP DHNVSPLVTA
GLDTLAVRVP AKACSRELLA AVGRPVAAPS ANPSGRISPT TADHVRAGLG GKIAAILDDG
PCGVGVESTI LGLAGAAPIL LRPGGLAAED IEHALGCTLM TRAEADPLTA PGQLMSHYAP
NASVRLEAQD FSPDEVSLGF GPGDFDLNLS PSGDLNEAAA NLFGHLHHLD ALGRPIAVAP
VPERGLGIAI NDRLRRAAAP RDS
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