| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_3049 |
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| Symbol | |
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| ID | 4075143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008043 |
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| Strand | - |
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| Start bp | 17544 |
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| End bp | 19208 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638004550 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_611285 |
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| Protein GI | 99078027 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCATT TCACCAGAAC AGGACAACCG TTGCCGGCCT CGCTGACACG TCAGGCACCC
GAGATGGCTG CTGATCCCGT CAGCCGCCGA GAGTTCCTGG CGACGGCCTG CTCTTTTGGC
GCCACCGCCG CCACGGCCTA TGCGATGATG GGTCTGAACG CCCCGGCACA GGCTGCGGCC
AATGCCCAGA TGGGGGGCAC CGTGCGCATC CAGCAGCAAC TTGTGGCCAT GCGTGACCCT
CGAAAGTTTG ACTTCAATTC GCTTGCCACC TTTACGCGCG GATGGCTGGA ATACCTTGTC
CAATACAACT CTGATGGCAG CTTCACCCCG ATCCTGCTGG ACAGCTGGGA AATCAGCGAG
GACGCCACCG AATATTCGCT CAATGTGCGC AAAGGTGTCA CCTGGAACAA CGGCGAGCCT
TTCACTGCCG ATGATGTGGC CAACAATATT GCCCGGTTCT GTGATGGCAC CGTCGAAGGC
AACGCCATGG CGGGCAAAAT GCAGGTGATG ATTGATCCCG AAACCAATCA AATACTGCCG
GGTGTGGTCG AAGTCACTGA CAGCCACTCG CTGAAGCTAA AGCTGCCGAA ACCGGACATT
TCGCTGATCG CGAGCTTTGC CGACTATCCC GCTGCCGTTG TGCATCCGTC GTTTGAGGAA
TTCTCGATGC TGGATAACCC GATCGGAACC GGGCCCTACC TGCCCGAGTT CTACAGTGTC
GGTGACAGTG CGGCGCTTGT GCGCAATCCC GATCACACAT GGTGGAACGC GGGCAATGGC
GGCTATATGG ACCGGGTCGA GTTCATCGAT TTCGGCGCGG ACCCTGCGGC CTTTTTTGCG
GGGGCGGACG CGGATGAATA CGACGTCAAT TACGACACCG AAGGCGACTA TATGGACGCC
TATGACTCGC TTGATGGCTG GACCAAGCAT GAGGTGACAA CCGCCGCCAC GGTACTTGCG
CGTTGCAACC AACTGGCCGA GGTGAATGGC AAAGCTGTCT ATGCCGATGC CCGCGTCCGC
CGTGCGCTTG CGATGGCCGT GGACAACGAA GTGGTGCTGG AAATCGCCTA TGGCGGGCAG
GGCCGTGCAG CGGAAAACCA CCATGTGTCT CCCGTGCATC CCGATTATGC CGACATCGGT
GCCCCTGTGC GCGATCCTGA GGTGGCAATG CAATTGCTGG AGGATGCCGG CATGTCGGAC
TTCGAGCACG AGCTGGTCTC GCTCGATGCG GCGTTCTGGA AGGCCACGGG CGACGCCATT
GCCGCGCAGC TGCGTGACGC TGGAATCAAG GTCAAACGCA CGGTGTTTCC GACCTCTACC
TTCTGGAACA ACTGGGCGAA ATACCCGTTC TCGGTGACGA ACTGGAACCA CCGCCCCCTC
GGCATTCAGA CACTCGCCTT GGCCTATCGC AGTGGTCAGG GATGGAACGA GTCCGGTTTT
GCCAATGCGG AGTTTGACGC GCTGGTCGAA GAGGCGCTGG CAACTGCCGA TCCAGAGGCG
CGCAGCAAAA TCATGGCCAA GCTTGAACAG ATCATGATCG ATGAAGGTGT CATCATCCAA
CCCTATTGGC GTTCGCTCTA CAACCATTCC AAGAGCAATC TGAAGGGCGC TGAAATCCAC
ATCTCCAACG AGCTTTATCC GCAGTACATG TATTGGGAAG CTTGA
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| Protein sequence | MTHFTRTGQP LPASLTRQAP EMAADPVSRR EFLATACSFG ATAATAYAMM GLNAPAQAAA
NAQMGGTVRI QQQLVAMRDP RKFDFNSLAT FTRGWLEYLV QYNSDGSFTP ILLDSWEISE
DATEYSLNVR KGVTWNNGEP FTADDVANNI ARFCDGTVEG NAMAGKMQVM IDPETNQILP
GVVEVTDSHS LKLKLPKPDI SLIASFADYP AAVVHPSFEE FSMLDNPIGT GPYLPEFYSV
GDSAALVRNP DHTWWNAGNG GYMDRVEFID FGADPAAFFA GADADEYDVN YDTEGDYMDA
YDSLDGWTKH EVTTAATVLA RCNQLAEVNG KAVYADARVR RALAMAVDNE VVLEIAYGGQ
GRAAENHHVS PVHPDYADIG APVRDPEVAM QLLEDAGMSD FEHELVSLDA AFWKATGDAI
AAQLRDAGIK VKRTVFPTST FWNNWAKYPF SVTNWNHRPL GIQTLALAYR SGQGWNESGF
ANAEFDALVE EALATADPEA RSKIMAKLEQ IMIDEGVIIQ PYWRSLYNHS KSNLKGAEIH
ISNELYPQYM YWEA
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